RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TXNL4AP83876 142 aaKnown RBP10.9□□□□□ -0.66
SKA3-206ENST00000475251 TRIP10Q15642 601 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 SLC9B1Q4ZJI4 515 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 ANXA8L1Q5VT79 327 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 OR4F3Q6IEY1 312 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 TNFAIP8L2Q6P589 184 aaPredicted RBP10.9□□□□□ -0.66
SKA3-206ENST00000475251 CCDC36Q8IYA8 594 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 ZNF440Q8IYI8 595 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 CLEC4FQ8N1N0 589 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
SKA3-206ENST00000475251 OR8J2Q8NGG1 315 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 AGR3Q8TD06 166 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 CNOT9Q92600 299 aaKnown RBP10.9□□□□□ -0.66
SKA3-206ENST00000475251 RAB8BQ92930 207 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 MS4A5Q9H3V2 200 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 HIF1ANQ9NWT6 349 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 SPEF1Q9Y4P9 236 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 A0A096LPE4 126 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 A0A096LPI6 279 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 A0A1W2PPZ6 126 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 SH3PXD2BA1X283 911 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
SKA3-206ENST00000475251 CLDN24A6NM45 220 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 NR5A2O00482 541 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 MSMBP08118 114 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ADRA2AP08913 450 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 IL7RP16871 459 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 CHI3L1P36222 383 aaPredicted RBP10.89□□□□□ -0.67
SKA3-206ENST00000475251 GPR6P46095 362 aaPredicted RBP10.89□□□□□ -0.67
SKA3-206ENST00000475251 EVX1P49640 407 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 SELENOPP49908 381 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 HILS1P60008 231 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 EMX2Q04743 252 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 HGFACQ04756 655 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 FUT5Q11128 374 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 DAG1Q14118 895 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 SAXO2Q658L1 398 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 NIPAL3Q6P499 406 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 C4orf33Q8N1A6 199 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ZCCHC24Q8N2G6 241 aaKnown RBP10.89□□□□□ -0.67
SKA3-206ENST00000475251 OR51F2Q8NH61 342 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ZG16BQ96DA0 208 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 C3orf30Q96M34 536 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 TRNT1Q96Q11 434 aaKnown RBP10.89□□□□□ -0.67
SKA3-206ENST00000475251 DPY30Q9C005 99 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 ASIC5Q9NY37 505 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 USP22Q9UPT9 525 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 CMAHPQ9Y471 501 aa10.89□□□□□ -0.67
SKA3-206ENST00000475251 PRSS51A0A1B0GVH4 220 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 AGAP5A6NIR3 686 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 A8MVM7 634 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 M0R233 179 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 SYNGR3O43761 229 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 DBIP07108 87 aaKnown RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 SAGP10523 405 aaPredicted RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 ANPEPP15144 967 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 ACHEP22303 614 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 ALDH3A1P30838 453 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 COPZ1P61923 177 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 TUBA1BP68363 451 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 TUBA4AP68366 448 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 EPS8Q12929 822 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 SNTB2Q13425 540 aaKnown RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 TUBA1AQ71U36 451 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 CDK20Q8IZL9 346 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 NEURL3Q96EH8 262 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 ZIM3Q96PE6 472 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 LRRC37BQ96QE4 947 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 TXLNGYQ9BZA5 131 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 MTHFD2LQ9H903 347 aaPredicted RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
SKA3-206ENST00000475251 RCE1Q9Y256 329 aa10.88□□□□□ -0.67
SKA3-206ENST00000475251 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 TMEM129A0AVI4 362 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 SMIM23A6NLE4 172 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 RPL36A-HNRNPH2H7BZ11 118 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 KCNAB3O43448 404 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 UPK3AO75631 287 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 CPSF4O95639 269 aaKnown RBP10.87□□□□□ -0.67
SKA3-206ENST00000475251 PNPP00491 289 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 CHRM4P08173 479 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
SKA3-206ENST00000475251 TMEM33P57088 247 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 PLAURQ03405 335 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 NPRL3Q12980 569 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 DPY19L1Q2PZI1 675 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 WBP2NLQ6ICG8 309 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 LRRC74BQ6ZQY2 392 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 ZCCHC23Q6ZST2 131 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 HMGN2P46Q86SG4 172 aa10.87□□□□□ -0.67
SKA3-206ENST00000475251 EPHX4Q8IUS5 362 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms