RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 LINC01356Q8N9X3 169 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 C1orf162Q8NEQ5 155 aaPredicted RBP12.82□□□□□ -0.36
PCCB-212ENST00000474833 ZNF563Q8TA94 476 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 PNPT1Q8TCS8 783 aaKnown RBP12.82□□□□□ -0.36
PCCB-212ENST00000474833 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 ZG16BQ96DA0 208 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 ITCHQ96J02 903 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
PCCB-212ENST00000474833 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 THUMPD1Q9NXG2 353 aaKnown RBP12.82□□□□□ -0.36
PCCB-212ENST00000474833 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 PRDM4Q9UKN5 801 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 DSPPQ9NZW4 1301 aa12.82□□□□□ -0.36
PCCB-212ENST00000474833 CLDN24A6NM45 220 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
PCCB-212ENST00000474833 DNPH1O43598 174 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 DBIP07108 87 aaKnown RBP12.81□□□□□ -0.36
PCCB-212ENST00000474833 IGFBP1P08833 259 aaPredicted RBP12.81□□□□□ -0.36
PCCB-212ENST00000474833 NR2F1P10589 423 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
PCCB-212ENST00000474833 HTR3AP46098 478 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 STX1BP61266 288 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 ACTG1P63261 375 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 SLC46A3Q7Z3Q1 461 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 OR9I1Q8NGQ6 314 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
PCCB-212ENST00000474833 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 TCF7L2Q9NQB0 619 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 CA10Q9NS85 328 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 CALML5Q9NZT1 146 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 DCTN4Q9UJW0 460 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
PCCB-212ENST00000474833 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 FAM157AC9JC47 383 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 SULT2B1O00204 365 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 ANP32DO95626 131 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 PMS2P2O95744 297 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 UQCRBP14927 111 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 IL7RP16871 459 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 RYKP34925 604 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 SERPINF1P36955 418 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 PPOXP50336 477 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CHN2P52757 468 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CRISP3P54108 245 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 DVL1P1P54792 670 aaPredicted RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 DSTNP60981 165 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 TRIP10Q15642 601 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 MAPK11Q15759 364 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 EFNB3Q15768 340 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 PDLIM3Q53GG5 364 aaPredicted RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 CCDC103Q8IW40 242 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 PEX5LQ8IYB4 626 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 ZNF440Q8IYI8 595 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 STON2Q8WXE9 905 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CNOT9Q92600 299 aaKnown RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 ZHX1-C8orf76Q96EF9 292 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CCDC28BQ9BUN5 200 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 PLK3Q9H4B4 646 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 METTL17Q9H7H0 456 aaPredicted RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 SLCO1B3Q9NPD5 702 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 CTPS2Q9NRF8 586 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 SLC7A10Q9NS82 523 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
PCCB-212ENST00000474833 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
PCCB-212ENST00000474833 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
PCCB-212ENST00000474833 ETFAP13804 333 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 HOXB9P17482 250 aaPredicted RBP12.79□□□□□ -0.36
PCCB-212ENST00000474833 CRATP43155 626 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 IDH3GP51553 393 aaPredicted RBP12.79□□□□□ -0.36
PCCB-212ENST00000474833 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
PCCB-212ENST00000474833 MAP2K6P52564 334 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 H3F3AP84243 136 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 LGALS3BPQ08380 585 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 FADDQ13158 208 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 RIN1Q13671 783 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 GTDC1Q4AE62 458 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 LIN52Q52LA3 116 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 C6orf10Q5SRN2 563 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 MRPL2Q5T653 305 aaKnown RBP12.79□□□□□ -0.36
PCCB-212ENST00000474833 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 HDXQ7Z353 690 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 ADGRG3Q86Y34 549 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 GTF2H4Q92759 462 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 VPS33AQ96AX1 596 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 DNAJA3Q96EY1 480 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
PCCB-212ENST00000474833 ARL5BQ96KC2 179 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms