RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 H1FNTQ75WM6 255 aaPredicted RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 HIST3H2AQ7L7L0 130 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 VTCN1Q7Z7D3 282 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 OR9K2Q8NGE7 335 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 HIST1H2ACQ93077 130 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 HS6ST2Q96MM7 605 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 MED18Q9BUE0 208 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 PTDSS2Q9BVG9 487 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 GORASP2Q9H8Y8 452 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 RIMS3Q9UJD0 308 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 ING1Q9UK53 422 aaPredicted RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 B3GALT5Q9Y2C3 310 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 GPR52Q9Y2T5 361 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 IGKV1D-42A0A075B6H8 117 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 ZNF814B7Z6K7 855 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 M0R082 166 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 KPNA4O00629 521 aaPredicted RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 AKAP8O43823 692 aaKnown RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 RAMP1O60894 148 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 KRT33AO76009 404 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 OR6A2O95222 327 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 CNOT4O95628 575 aaKnown RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 MT-ATP6P00846 226 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 PPP3CBP16298 524 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 PTNP21246 168 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 IL32P24001 234 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 GRPRP30550 384 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 PMS2P3Q13401 168 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 P2RY6Q15077 328 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 LINC00114Q6XXX2 140 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 AAED1Q7RTV5 226 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 RBM15BQ8NDT2 890 aaKnown RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 ZNF417Q8TAU3 575 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 KISS1RQ969F8 398 aaPredicted RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 PRRC1Q96M27 445 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 NSMCE2Q96MF7 247 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 ZNF587Q96SQ5 575 aaPredicted RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 USB1Q9BQ65 265 aaKnown RBP12.2□□□□□ -0.46
USF1-205ENST00000473969 SLC19A3Q9BZV2 496 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 MCCC2Q9HCC0 563 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 UPB1Q9UBR1 384 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 CD300AQ9UGN4 299 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 FLVCR1Q9Y5Y0 555 aa12.2□□□□□ -0.46
USF1-205ENST00000473969 FTCDNL1E5RQL4 147 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 ADAP00813 363 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 UMPSP11172 480 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 ITGA2P17301 1181 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 YAP1P46937 504 aaKnown RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 FBXW9Q5XUX1 488 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 RINLQ6ZS11 566 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 Q6ZT83 130 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 ABHD12BQ7Z5M8 362 aaPredicted RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 CXorf67Q86X51 503 aaPredicted RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 SCAIQ8N9R8 606 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 MCUR1Q96AQ8 359 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 C1orf21Q9H246 121 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 NANSQ9NR45 359 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 DCAF13Q9NV06 445 aaKnown RBP12.19□□□□□ -0.46
USF1-205ENST00000473969 PRSS50Q9UI38 385 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 MED31Q9Y3C7 131 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 HCFC1P51610 2035 aa12.19□□□□□ -0.46
USF1-205ENST00000473969 CIB4A0PJX0 185 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 ARPC2O15144 300 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 GOSR1O95249 250 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 CH25HO95992 272 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 IGHV3-9P01782 118 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 BGLAPP02818 100 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 THY1P04216 161 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 PSMB1P20618 241 aaKnown RBP12.18□□□□□ -0.46
USF1-205ENST00000473969 AHCYP23526 432 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 MSX2P35548 267 aaPredicted RBP12.18□□□□□ -0.46
USF1-205ENST00000473969 ITGADQ13349 1161 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 TRAM2Q15035 370 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 POU4F3Q15319 338 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 SFRP5Q5T4F7 317 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 STAC2Q6ZMT1 411 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 CREB3L2Q70SY1 520 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 NKAIN4Q8IVV8 208 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 UEVLDQ8IX04 471 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 GABRG1Q8N1C3 465 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 KDM8Q8N371 416 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 ADPRHL1Q8NDY3 354 aa12.18□□□□□ -0.46
USF1-205ENST00000473969 OR5J2Q8NH18 312 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms