RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SELENONQ9NZV5 590 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 ABCD2Q9UBJ2 740 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 SLC9A8Q9Y2E8 581 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 AP3M1Q9Y2T2 418 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 SH3GLB1Q9Y371 365 aa16.73■□□□□ 0.27
PTCD3-210ENST00000473829 CREBBPQ92793 2442 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 LRRN3E7EW58 273 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 M0R082 166 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 CHP2O43745 196 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 MRPL33O75394 65 aaKnown RBP16.72■□□□□ 0.27
PTCD3-210ENST00000473829 GOSR1O95249 250 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 BGLAPP02818 100 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 PPP3CBP16298 524 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 CBLP22681 906 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 OR1E2P47887 323 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 FOXG1P55316 489 aaPredicted RBP16.72■□□□□ 0.27
PTCD3-210ENST00000473829 PSME3P61289 254 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 ITGADQ13349 1161 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 P2RY6Q15077 328 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 FBXW9Q5XUX1 488 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 TMEM225Q6GV28 225 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 C5orf46Q6UWT4 87 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 STEAP2Q8NFT2 490 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF417Q8TAU3 575 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 TMEM45BQ96B21 275 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 MOGAT1Q96PD6 335 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 HS3ST6Q96QI5 342 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 CCT8L2Q96SF2 557 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 ZNF587Q96SQ5 575 aaPredicted RBP16.72■□□□□ 0.27
PTCD3-210ENST00000473829 TMEM43Q9BTV4 400 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 OR10A4Q9H209 315 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 ARL8BQ9NVJ2 186 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 B3GAT1Q9P2W7 334 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 MALT1Q9UDY8 824 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 BAG5Q9UL15 447 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 SLC7A7Q9UM01 511 aa16.72■□□□□ 0.27
PTCD3-210ENST00000473829 MYO9AB2RTY4 2548 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 TRAPPC13A5PLN9 417 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 CNOT4O95628 575 aaKnown RBP16.71■□□□□ 0.27
PTCD3-210ENST00000473829 IL32P24001 234 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 GRPRP30550 384 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 DNAJA1P31689 397 aaKnown RBP16.71■□□□□ 0.27
PTCD3-210ENST00000473829 SEZ6L2Q6UXD5 910 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 BHLHA15Q7RTS1 189 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-210ENST00000473829 WFDC8Q8IUA0 241 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 EPHX4Q8IUS5 362 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 UBE2J2Q8N2K1 259 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 PIK3IP1Q96FE7 263 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 PRSS27Q9BQR3 290 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 HDHD5Q9BXW7 423 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 PLEKHF2Q9H8W4 249 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 SLC7A10Q9NS82 523 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 RASD1Q9Y272 281 aa16.71■□□□□ 0.27
PTCD3-210ENST00000473829 CCDC168Q8NDH2 2452 aa16.71■□□□□ 0.26
PTCD3-210ENST00000473829 CXCR6O00574 342 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 KLF4O43474 513 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 OR2T1O43869 369 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 DCTN3O75935 186 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 IFNA14P01570 189 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 GTF2E2P29084 291 aaKnown RBP16.7■□□□□ 0.26
PTCD3-210ENST00000473829 TAB1Q15750 504 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 TSPO2Q5TGU0 170 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 DEF8Q6ZN54 512 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 CREB3L2Q70SY1 520 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
PTCD3-210ENST00000473829 ANKS4BQ8N8V4 417 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 OR6S1Q8NH40 331 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 TPD52L3Q96J77 140 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 LRRC37BQ96QE4 947 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF426Q9BUY5 554 aa16.7■□□□□ 0.26
PTCD3-210ENST00000473829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-210ENST00000473829 PDLIM1O00151 329 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 VAMP5O95183 116 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 ITGA5P08648 1049 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 NCK1P16333 377 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 SELENOPP49908 381 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 SELENOWP63302 87 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 LGALS3BPQ08380 585 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 FAPQ12884 760 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 ALKBH2Q6NS38 261 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 AAED1Q7RTV5 226 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 VTCN1Q7Z7D3 282 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 SLC41A3Q96GZ6 507 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 EPYCQ99645 322 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 KCTD14Q9BQ13 255 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-210ENST00000473829 SPAG4Q9NPE6 437 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 ASB6Q9NWX5 421 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 TAGLN3Q9UI15 199 aa16.69■□□□□ 0.26
PTCD3-210ENST00000473829 RAI1Q7Z5J4 1906 aaPredicted RBP16.68■□□□□ 0.26
PTCD3-210ENST00000473829 RAD51DO75771 328 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 FAM107AO95990 144 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 HPRP00739 348 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 FUT4P22083 530 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 PIN1Q13526 163 aaPredicted RBP16.68■□□□□ 0.26
PTCD3-210ENST00000473829 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 H1FNTQ75WM6 255 aaPredicted RBP16.68■□□□□ 0.26
PTCD3-210ENST00000473829 NKAIN4Q8IVV8 208 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 FITM2Q8N6M3 262 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 RNF148Q8N7C7 305 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 SLCO5A1Q9H2Y9 848 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms