RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 UNC119BA6NIH7 251 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 FAM183AA6NL82 134 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 GABARAPH6UMI1 98 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OGG1O15527 345 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 CLEC3AO75596 197 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 REM1O75628 298 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ATP1B1P05026 303 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SBK2P0C263 348 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ELFN1P0C7U0 828 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SNRPBP14678 240 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 DRD5P21918 477 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 MAT2AP31153 395 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 RGS8P57771 180 aaPredicted RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 MRPS10P82664 201 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 PRR5P85299 388 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TMEM35AQ53FP2 167 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OLFML2AQ68BL7 652 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 VRK2Q86Y07 508 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TRAPPC5Q8IUR0 188 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR10H4Q8NGA5 316 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR52L1Q8NGH7 329 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR4C6Q8NH72 309 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 GHSRQ92847 366 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 FBXW5Q969U6 566 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 DTD2Q96FN9 168 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 KLHDC7BQ96G42 594 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 IL17FQ96PD4 163 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR7D2Q96RA2 312 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TEAD3Q99594 435 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 HDAC8Q9BY41 377 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR52A5Q9H2C5 316 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR52D1Q9H346 318 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 CDCP1Q9H5V8 836 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 GPN1Q9HCN4 374 aaPredicted RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 KLHL1Q9NR64 748 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 MGAT4CQ9UBM8 478 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TAC3Q9UHF0 121 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 CDC42EP2O14613 210 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ATXN7O15265 892 aaPredicted RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 EMC8O43402 210 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 GMDSO60547 372 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 POP7O75817 140 aaKnown RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 PRNPP04156 253 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 CTSLP07711 333 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 UCHL1P09936 223 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 BMP7P18075 431 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 RAB3AP20336 220 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 NT5EP21589 574 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 S100A11P31949 105 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 PRKAG1P54619 331 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 ZNF85Q03923 595 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 POU4F2Q12837 409 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 KRT33BQ14525 404 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 HLXQ14774 488 aaPredicted RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 CDCP2Q5VXM1 449 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ZNF626Q68DY1 528 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 CFAP77Q6ZQR2 320 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ZNF765Q7L2R6 523 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 HMGN2P46Q86SG4 172 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 C17orf47Q8NEP4 570 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 OR4D9Q8NGE8 314 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 TMEM255BQ8WV15 326 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 KLK6Q92876 244 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ARRDC3Q96B67 414 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 HS6ST2Q96MM7 605 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 YIPF4Q9BSR8 244 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 QRSL1Q9H0R6 528 aaKnown RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 OR2AG1Q9H205 316 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 CMC2Q9NRP2 79 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 NKIRAS2Q9NYR9 191 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 KLHL9Q9P2J3 617 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ST6GALNAC2Q9UJ37 374 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 ZNF223Q9UK11 482 aaPredicted RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 FBXO9Q9UK97 447 aaPredicted RBP8.8□□□□□ -1
HDAC3-205ENST00000469550 ASF1AQ9Y294 204 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 KCNE3Q9Y6H6 103 aa8.8□□□□□ -1
HDAC3-205ENST00000469550 A0A1W2PQU0 124 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PRR23D1E9PI22 279 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 ABCD4O14678 606 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 FRS3O43559 492 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SIGLEC6O43699 453 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 VEGFDO43915 354 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PIP5K1CO60331 668 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 RP2O75695 350 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 RGS11O94810 467 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 RCBTB2O95199 551 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 NTN1O95631 604 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 HIST1H2ABP04908 130 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 THEGLP0DJG4 465 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 GIMD1P0DJR0 217 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PRR23D2P0DMB1 279 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 GABRA1P14867 456 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PPP3CBP16298 524 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 HNRNPA2B1P22626 353 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 MAPK3P27361 379 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 AKT2P31751 481 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms