RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 GPAT4Q86UL3 456 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 HIPK1Q86Z02 1210 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 MIER2Q8N344 545 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 A4GALTQ9NPC4 353 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMEM45AQ9NWC5 275 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 ADPRHL2Q9NX46 363 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 SVEP1Q4LDE5 3571 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 A0A096LPI6 279 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 H7C417 338 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 FRS3O43559 492 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 FZD7O75084 574 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 WNT11O96014 354 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 SELENOPP49908 381 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 NUDT6P53370 316 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 HOXC5Q00444 222 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 EGR4Q05215 589 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 SWI5Q1ZZU3 235 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 HIKESHIQ53FT3 197 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 ZNF311Q5JNZ3 666 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 C6orf10Q5SRN2 563 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 BEND6Q5SZJ8 279 aaPredicted RBP12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 SLC2A7Q6PXP3 512 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 LINGO2Q7L985 606 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 FUNDC1Q8IVP5 155 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 MFSD8Q8NHS3 518 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 HTRA1Q92743 480 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 MAL2Q969L2 176 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 PTDSS2Q9BVG9 487 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 ARMC7Q9H6L4 198 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 OBP2BQ9NPH6 170 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 SLC52A3Q9NQ40 469 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 RASD1Q9Y272 281 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 USH1CQ9Y6N9 552 aa12.92□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMEM247A6NEH6 219 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 UPK3AO75631 287 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 CDH2P19022 906 aaPredicted RBP12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 NCF2P19878 526 aaPredicted RBP12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 LOXL1Q08397 574 aaPredicted RBP12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 FADDQ13158 208 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 TBRG1Q3YBR2 411 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 CLEC2AQ6UVW9 174 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 ABHD12BQ7Z5M8 362 aaPredicted RBP12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 MSRB3Q8IXL7 192 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 KDM8Q8N371 416 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 TNFRSF13CQ96RJ3 184 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 LINC00470Q9BZP3 86 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 RAD21L1Q9H4I0 556 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 SLC25A37Q9NYZ2 338 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 SLAMF8Q9P0V8 285 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 MOKQ9UQ07 419 aa12.91□□□□□ -0.34
SDCCAG3-209ENST00000468963 FBN3Q75N90 2809 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 IGHV1-18A0A0C4DH31 117 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 OR6C65A6NJZ3 312 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ATP6V1G2-DDX39BF2Z307 99 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ZNF432O94892 652 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 TGDSO95455 350 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 LGI1O95970 557 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 F12P00748 615 aaPredicted RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ETS2P15036 469 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 PAX7P23759 505 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 EFNA4P52798 201 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 CHRNB3Q05901 458 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 LRIF1Q5T3J3 769 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 NIPAL3Q6P499 406 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ANKRD16Q6P6B7 361 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 BLOC1S3Q6QNY0 202 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 C6orf89Q6UWU4 347 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 CXXC5Q7LFL8 322 aaKnown RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 C10orf111Q8N326 155 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 LSMEM1Q8N8F7 131 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 SPATA3Q8NHX4 192 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 BBS10Q8TAM1 723 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 MAGEE2Q8TD90 523 aaPredicted RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 C12orf10Q9HB07 376 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 CRNNQ9UBG3 495 aaPredicted RBP12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 PMF1-BGLAPU3KQ54 211 aa12.9□□□□□ -0.34
SDCCAG3-209ENST00000468963 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 RPL36A-HNRNPH2H7BZ11 118 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 NR5A2O00482 541 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 KRT33AO76009 404 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 AHSA1O95433 338 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 PNMTP11086 282 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 BMP4P12644 408 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC25A16P16260 332 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 PRKAR1BP31321 381 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms