RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZNF420Q8TAQ5 688 aaPredicted RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 PTP4A1Q93096 173 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ABI3Q9P2A4 366 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 DIMT1Q9UNQ2 313 aaKnown RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 CD14P08571 375 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ATP6V1E1P36543 226 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 EIF1P41567 113 aaKnown RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMC4-209ENST00000468653 LRRC75AQ8NAA5 344 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 OR5J2Q8NH18 312 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 POC1BQ8TC44 478 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 HCAR1Q9BXC0 346 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ASPNQ9BXN1 380 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 OR51V1Q9H2C8 321 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 FGF20Q9NP95 211 aaPredicted RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 PTPRBP23467 1997 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 A0A087WZY1 265 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 ZNF701M0R085 212 aaPredicted RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 MYL12AP19105 171 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 SLC16A1P53985 500 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 RPS7P62081 194 aaKnown RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 SGCBQ16585 318 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.14■□□□□ 0.332e-41■■■■■ 207.1
SMC4-209ENST00000468653 SLC6A19Q695T7 634 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 SDR9C7Q8NEX9 313 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 OR6S1Q8NH40 331 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 NTNG2Q96CW9 530 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 GNRHR2Q96P88 292 aa17.14■□□□□ 0.33
SMC4-209ENST00000468653 NAA50Q9GZZ1 169 aaKnown RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 CHCHD3Q9NX63 227 aaKnown RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 CDV3Q9UKY7 258 aaKnown RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 SPIN1Q9Y657 262 aaPredicted RBP17.14■□□□□ 0.33
SMC4-209ENST00000468653 GVINP1Q7Z2Y8 2422 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 FAM186AA6NE01 2351 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 H3BML4 177 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 SERPINI2O75830 405 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 DXOO77932 396 aaKnown RBP17.13■□□□□ 0.33
SMC4-209ENST00000468653 OR6A2O95222 327 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TSPAN19P0C672 248 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 APEHP13798 732 aaKnown RBP17.13■□□□□ 0.33
SMC4-209ENST00000468653 DPP4P27487 766 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 GTF2E2P29084 291 aaKnown RBP17.13■□□□□ 0.33
SMC4-209ENST00000468653 GRPRP30550 384 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 CASRP41180 1078 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TMBIM6P55061 237 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 MFSD13AQ14CX5 517 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 MED22Q15528 200 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TIGD6Q17RP2 521 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 RNLSQ5VYX0 342 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TIGD3Q6B0B8 471 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 SHFQ7M4L6 423 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 ZNF367Q7RTV3 350 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 VASH2Q86V25 355 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 PSD4Q8NDX1 1056 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 OR5M1Q8NGP8 315 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 MFSD8Q8NHS3 518 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 ZBTB8AQ96BR9 441 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 RASD2Q96D21 266 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TMEM41AQ96HV5 264 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 ARL5BQ96KC2 179 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 Q96M85 177 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 FUNDC2Q9BWH2 189 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 POTEKPQ9BYX7 375 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 GRHPRQ9UBQ7 328 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 CLEC2DQ9UHP7 191 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 EML6Q6ZMW3 1958 aa17.13■□□□□ 0.33
SMC4-209ENST00000468653 TEX13CA0A0J9YWL9 993 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 SLC22A31A6NKX4 558 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 C11orf98E9PRG8 122 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 EFNA2O43921 213 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 IL11P20809 199 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 ADH6P28332 368 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 IDUAP35475 653 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 DSCR4P56555 118 aaPredicted RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 ARMC4Q5T2S8 1044 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 ATP1A1-AS1Q5TC04 95 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 C3orf33Q6P1S2 294 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 JAZF1Q86VZ6 243 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 C12orf43Q96C57 262 aaKnown RBP17.12■□□□□ 0.33
SMC4-209ENST00000468653 NMNAT3Q96T66 252 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 MND1Q9BWT6 205 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 TAS2R5Q9NYW4 299 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 SEC14L4Q9UDX3 406 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 DKKL1Q9UK85 242 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 M0R082 166 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 IMPA2O14732 288 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 MYL12BO14950 172 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 RNF13O43567 381 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 CBR3O75828 277 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 F10P00742 488 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 HSMCR30P0CW71 290 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 CLUP10909 449 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 AHCYP23526 432 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 SDHAP31040 664 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 DNASE1L1P49184 302 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 FOXK1P85037 733 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 TMED1Q13445 227 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 OR7A5Q15622 319 aa17.12■□□□□ 0.33
SMC4-209ENST00000468653 B3GLCTQ6Y288 498 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms