RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CYP4Z1Q86W10 505 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 LDLRAD3Q86YD5 345 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CYP4Z2PQ8N1L4 340 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 GALNT4Q8N4A0 578 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2C3Q8N628 320 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF527Q8NB42 609 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CATSPER1Q8NEC5 780 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ATP6V1C2Q8NEY4 427 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 FDCSPQ8NFU4 85 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR4K17Q8NGC6 315 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR52E4Q8NGH9 312 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR6T1Q8NGN1 323 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR5M1Q8NGP8 315 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 GRHL3Q8TE85 626 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 GEMIN6Q8WXD5 167 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PSMF1Q92530 271 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 HGDQ93099 445 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SPACA9Q96E40 222 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DNAJA3Q96EY1 480 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 AGAP4Q96P64 663 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF300Q96RE9 604 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ARHGDIGQ99819 225 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 UTP23Q9BRU9 249 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 FNDC11Q9BVV2 318 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 HES7Q9BYE0 225 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 RTN4RQ9BZR6 473 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DSN1Q9H410 356 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TOR3AQ9H497 397 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 MAGIXQ9H6Y5 334 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DCLRE1BQ9H816 532 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM27Q9HBJ8 222 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 KLHL1Q9NR64 748 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SDHAF3Q9NRP4 125 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SELENONQ9NZV5 590 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 LRFN1Q9P244 771 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ABCG2Q9UNQ0 655 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC9A8Q9Y2E8 581 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 U3KQV3 271 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF292O60281 2723 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DSPPQ9NZW4 1301 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PCSK5Q92824 1860 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 CEP250Q9BV73 2442 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1W2PQ72 361 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 AQP7P3A6NL99 342 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NPIPB9F8W1W9 429 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PDLIM1O00151 329 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RAB27BO00194 218 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TAF4O00268 1085 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SYT5O00445 386 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 KPNA4O00629 521 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF264O43296 627 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 FADS1O60427 444 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TRAPPC6AO75865 159 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NXPH3O95157 252 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 GADD45GO95257 159 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NTN1O95631 604 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OPN1LWP04000 364 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SEMG1P04279 462 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 H1F0P07305 194 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 CHRM2P08172 466 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 GUSBP08236 651 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 LINGO3P0C6S8 592 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 UBL4AP11441 157 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 FCGR1AP12314 374 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 GP1BBP13224 206 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF23P17027 643 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 CNR1P21554 472 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RPS4Y1P22090 263 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 LCN1P31025 176 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RRM2P31350 389 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RFC3P40938 356 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PTGDSP41222 190 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 CASP3P42574 277 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PTDSS1P48651 473 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 HLCSP50747 726 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ARHGDIAP52565 204 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 COPZ1P61923 177 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PSPHP78330 225 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PLGLB1Q02325 96 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF117Q03924 483 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 C17orf67Q0P5P2 114 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 FOXI1Q12951 378 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RIPK1Q13546 671 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PMS2P11Q13670 270 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OR1C1Q15619 314 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TRIP10Q15642 601 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TOMM34Q15785 309 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NPTX1Q15818 432 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ATP6AP1Q15904 470 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SNCBQ16143 134 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NRF1Q16656 503 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 EXOC3L2Q2M3D2 409 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 COL28A1Q2UY09 1125 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 FGD3Q5JSP0 725 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ENTPD8Q5MY95 495 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 DCST1Q5T197 706 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OTUD3Q5T2D3 398 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2T5Q6IEZ7 315 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC25A25Q6KCM7 469 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms