RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NR4A2P43354 598 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CAPZA2P47755 286 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 STARP49675 285 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DSCR4P56555 118 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 B3GALT5-AS1P59052 145 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 BASP1P80723 227 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 MRPS15P82914 257 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 HMGCS1Q01581 520 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TNFRSF17Q02223 184 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 BSPH1Q075Z2 132 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 NPRL3Q12980 569 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DHX34Q14147 1143 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 P2RY6Q15077 328 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PON3Q15166 354 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 GPR68Q15743 365 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 AP5B1Q2VPB7 878 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 HFEQ30201 348 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 GLYR1Q49A26 553 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF628Q5EBL2 1059 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PAGE2BQ5JRK9 111 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TEDDM1Q5T9Z0 273 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 HHATQ5VTY9 493 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 OR7E24Q6IFN5 339 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 KRT80Q6KB66 452 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF544Q6NX49 715 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 C8orf74Q6P047 294 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 GPR180Q86V85 440 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 COMTD1Q86VU5 262 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DENND6AQ8IWF6 608 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 RNF10Q8N5U6 811 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TEX29Q8N6K0 151 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 UBL4BQ8N7F7 174 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF615Q8N8J6 731 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 BANPQ8N9N5 519 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 KBTBD8Q8NFY9 601 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF671Q8TAW3 534 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 FNDC9Q8TBE3 224 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SETD6Q8TBK2 473 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 HGDQ93099 445 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 RFKQ969G6 155 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PPWD1Q96BP3 646 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 S100PBPQ96BU1 408 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TMCO6Q96DC7 493 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 WDR34Q96EX3 536 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 LINGO1Q96FE5 620 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CHP1Q99653 195 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DHRS9Q9BPW9 319 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 MAPKAP1Q9BPZ7 522 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PIMREGQ9BSJ6 248 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 LRRC1Q9BTT6 524 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PINK1Q9BXM7 581 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 POTEKPQ9BYX7 375 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SERHL2Q9H4I8 314 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CXorf21Q9HAI6 301 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 FBXO6Q9NRD1 293 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 MRPL15Q9P015 296 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DKKL1Q9UK85 242 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 FBXO5Q9UKT4 447 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SLC22A14Q9Y267 594 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 LOC390937A0A1W2PQ73 354 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 GXYLT2A0PJZ3 443 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 FAM90A20PA6NIJ5 464 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SHISA9B4DS77 424 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 E9PBE3 544 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 GOLGA8MH3BSY2 632 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 STX16-NPEPL1H3BU86 382 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SMAD9O15198 467 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ZIC3O60481 467 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CYTIPO60759 359 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 RPSAP08865 295 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TPSB2P20231 275 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 PRKACBP22694 351 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 IL32P24001 234 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TAGLN2P37802 199 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SLC1A2P43004 574 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SSR2P43308 183 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 MAGEA1P43355 309 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 PDLIM4P50479 330 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 GTF2A1P52655 376 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CDH11P55287 796 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CLDN15P56746 228 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ID2Q02363 134 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CHRNB3Q05901 458 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 GGTLC2Q14390 218 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SEC23BQ15437 767 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TPSAB1Q15661 275 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TAB1Q15750 504 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 HIST2H2ACQ16777 129 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 MEP1BQ16820 701 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 PPP1R3AQ16821 1122 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 AWAT1Q58HT5 328 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 C6orf163Q5TEZ5 329 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 HIST2H2AA3Q6FI13 130 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CES3Q6UWW8 571 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TMEM64Q6YI46 380 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF600Q6ZNG1 722 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 DGAT2L6Q6ZPD8 337 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms