RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 GALNT5Q7Z7M9 940 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 STK32CQ86UX6 486 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 ZNF100Q8IYN0 542 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 KDM8Q8N371 416 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 ZNF417Q8TAU3 575 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 TMEM239Q8WW34 195 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 RNASE6Q93091 150 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 ASB9Q96DX5 294 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 ZNF587Q96SQ5 575 aaPredicted RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 PRSS27Q9BQR3 290 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 TACO1Q9BSH4 297 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 USP9YO00507 2555 aaPredicted RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 FREM1Q5H8C1 2179 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 A8MXE2 369 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 FTCDNL1E5RQL4 147 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 EBAG9O00559 213 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 GSC2O15499 205 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 BGLAPP02818 100 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 FABP3P05413 133 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 ITGA2P17301 1181 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 UGT2B15P54855 530 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 H3F3AP84243 136 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 VLDLRP98155 873 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 LTBQ06643 244 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 PMS2P3Q13401 168 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
UBA3-209ENST00000466763 MFSD13AQ14CX5 517 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 MTX3Q5HYI7 312 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 LCN8Q6JVE9 175 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 MEX3BQ6ZN04 569 aaKnown RBP12.35□□□□□ -0.43
UBA3-209ENST00000466763 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 RRM2BQ7LG56 351 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 OFCC1Q8IZS5 231 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 MOGAT1Q96PD6 335 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 CADM1Q9BY67 442 aaKnown RBP12.35□□□□□ -0.43
UBA3-209ENST00000466763 KLHL4Q9C0H6 718 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 NDUFAF4Q9P032 175 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 ING1Q9UK53 422 aaPredicted RBP12.35□□□□□ -0.43
UBA3-209ENST00000466763 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 MED31Q9Y3C7 131 aa12.35□□□□□ -0.43
UBA3-209ENST00000466763 PTPN13Q12923 2485 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 ZNF716A6NP11 495 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 ZNF724A8MTY0 619 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 FFAR1O14842 300 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 MRPL33O75394 65 aaKnown RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 VAMP5O95183 116 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 OR6A2O95222 327 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 CGAP01215 116 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 CD8BP10966 210 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 COX6B1P14854 86 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 POU2F1P14859 743 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 RHCEP18577 417 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 RBM34P42696 430 aaKnown RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 SPIBQ01892 262 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 TFF3Q07654 80 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 PDK3Q15120 406 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 CASP12Q6UXS9 341 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 ZNF730Q6ZMV8 503 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 H1FNTQ75WM6 255 aaPredicted RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 ZDHHC21Q8IVQ6 265 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 OR9K2Q8NGE7 335 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 OR52J3Q8NH60 311 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 C7orf34Q96L11 122 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 SLC19A3Q9BZV2 496 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 NMNAT1Q9HAN9 279 aaPredicted RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 MEPEQ9NQ76 525 aaPredicted RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 NANSQ9NR45 359 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 GALNT8Q9NY28 637 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 FOXD3Q9UJU5 478 aaPredicted RBP12.34□□□□□ -0.43
UBA3-209ENST00000466763 TESMINQ9Y4I5 508 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
UBA3-209ENST00000466763 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 C11orf98E9PRG8 122 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 PIP5K1CO60331 668 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 SERPINI2O75830 405 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 IGHV3-9P01782 118 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms