RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SMYD1Q8NB12 490 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ELOA3Q8NG57 546 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 TMEM171Q8WVE6 324 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 TAAR8Q969N4 342 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 Q96MF0 132 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ZNF607Q96SK3 696 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 KAT8Q9H7Z6 458 aaKnown RBP19.13■□□□□ 0.65
LIME1-203ENST00000465591 C12orf10Q9HB07 376 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ZNF701Q9NV72 531 aaPredicted RBP19.13■□□□□ 0.65
LIME1-203ENST00000465591 UPB1Q9UBR1 384 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 RPS6KB2Q9UBS0 482 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ANGPT4Q9Y264 503 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 CSPG4Q6UVK1 2322 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 FZD7O75084 574 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 PAX1P15863 534 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 SELENOPP49908 381 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 ZNF83P51522 516 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 RGS8P57771 180 aaPredicted RBP19.12■□□□□ 0.65
LIME1-203ENST00000465591 SPOCK1Q08629 439 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 CYP51A1Q16850 503 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 NET1Q7Z628 596 aaPredicted RBP19.12■□□□□ 0.65
LIME1-203ENST00000465591 ARMC8Q8IUR7 673 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 C11orf65Q8NCR3 313 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 GPR32P1Q8NGA4 272 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 FBXW5Q969U6 566 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 C18orf12Q96KH6 178 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 SLCO5A1Q9H2Y9 848 aa19.12■□□□□ 0.65
LIME1-203ENST00000465591 ABCD4O14678 606 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 PTNP21246 168 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 GZMMP51124 257 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 OR1Q1Q15612 314 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 DUSP7Q16829 419 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 PGGHGQ32M88 737 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 ALG10BQ5I7T1 473 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 PRSS57Q6UWY2 283 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 LINGO2Q7L985 606 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 C1QTNF6Q9BXI9 259 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 PIF1Q9H611 641 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 B3GAT1Q9P2W7 334 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 TESQ9UGI8 421 aaKnown RBP19.11■□□□□ 0.65
LIME1-203ENST00000465591 RASD1Q9Y272 281 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 MAGED1Q9Y5V3 778 aaPredicted RBP19.11■□□□□ 0.65
LIME1-203ENST00000465591 NAV3Q8IVL0 2385 aa19.11■□□□□ 0.65
LIME1-203ENST00000465591 NIPBLQ6KC79 2804 aaeCLIP19.1■□□□□ 0.65
LIME1-203ENST00000465591 ZANQ9Y493 2812 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 A0A0B4J2E0 115 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 A0A1B0GX12 115 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 PRORSD1PA6NEY8 169 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 TRIM64A6NGJ6 449 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 TRIM64BA6NI03 449 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 M0QX08 132 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 M0R3H8 397 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 FXYD1O00168 92 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 SERPINB7O75635 380 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 VAMP5O95183 116 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 MPGP29372 298 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 GUCY1A3Q02108 690 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 RBBP4Q09028 425 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 NPTX1Q15818 432 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 OR7E24Q6IFN5 339 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 ULK3Q6PHR2 472 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 OR4D11Q8NGI4 311 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 OR10A6Q8NH74 314 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 SMAP2Q8WU79 429 aaPredicted RBP19.1■□□□□ 0.65
LIME1-203ENST00000465591 DNAJA4Q8WW22 397 aaPredicted RBP19.1■□□□□ 0.65
LIME1-203ENST00000465591 SLC38A4Q969I6 547 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 ARHGDIGQ99819 225 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 SLC17A5Q9NRA2 495 aa19.1■□□□□ 0.65
LIME1-203ENST00000465591 H7C1Q1 480 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 M0R082 166 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 OVOL3O00110 214 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 LGI1O95970 557 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 INHBBP09529 407 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 CBLP22681 906 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 GRPRP30550 384 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 ARFIP2P53365 341 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 CRYBA2P53672 197 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 RPS4XP62701 263 aaKnown RBP19.09■□□□□ 0.65
LIME1-203ENST00000465591 LTBQ06643 244 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 KLF10Q13118 480 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 NRF1Q16656 503 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 RABL3Q5HYI8 236 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 FAM69AQ5T7M9 428 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 FAM91A1Q658Y4 838 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 NANOGP8Q6NSW7 305 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 NIPAL3Q6P499 406 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 POMGNT2Q8NAT1 580 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 C1orf162Q8NEQ5 155 aaPredicted RBP19.09■□□□□ 0.65
LIME1-203ENST00000465591 ZNF417Q8TAU3 575 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 ALKBH3Q96Q83 286 aaPredicted RBP19.09■□□□□ 0.65
LIME1-203ENST00000465591 ZNF587Q96SQ5 575 aaPredicted RBP19.09■□□□□ 0.65
LIME1-203ENST00000465591 CXorf56Q9H5V9 222 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 NANOGQ9H9S0 305 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 SAR1AQ9NR31 198 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 KLHL14Q9P2G3 628 aa19.09■□□□□ 0.65
LIME1-203ENST00000465591 NSD1Q96L73 2696 aaPredicted RBP19.08■□□□□ 0.65
LIME1-203ENST00000465591 A0A087WUJ7 227 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 UPK3AO75631 287 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 CD8AP01732 235 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TROVE2P10155 538 aaKnown RBP eCLIP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms