RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RAPGEF5Q92565 580 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 UFD1Q92890 307 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 UCN3Q969E3 161 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 LRRC58Q96CX6 371 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 C10orf35Q96D05 121 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CMTM7Q96FZ5 175 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 FCRL1Q96LA6 429 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TSG101Q99816 390 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CCT7Q99832 543 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TMEM246Q9BRR3 403 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CHRDL1Q9BU40 450 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RIOK2Q9BVS4 552 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 OR11A1Q9GZK7 315 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 POLR2J2Q9GZM3 115 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 POLR2J3Q9H1A7 115 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 DEFB127Q9H1M4 99 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 SLC25A22Q9H936 323 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 NHEJ1Q9H9Q4 299 aaPredicted RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 NANOGQ9H9S0 305 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 LY9Q9HBG7 655 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 THUMPD1Q9NXG2 353 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TREM2Q9NZC2 230 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PIGLQ9Y2B2 252 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 ASB3Q9Y575 518 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CHD4Q14839 1912 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 KANK1Q14678 1352 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A0G2JN53 185 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A0U1RQS6 177 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A1B0GUA9 196 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM240BA0A1B0GVZ2 78 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OR52A4PA6NMU1 304 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FOXE1O00358 373 aaPredicted RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ABCD4O14678 606 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 RGS16O15492 202 aaPredicted RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF208O43345 1280 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 RIPK2O43353 540 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 TIMM8AO60220 97 aaPredicted RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 B4GALT2O60909 372 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ATP5LO75964 103 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OPN1MWP04001 364 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FGF1P05230 155 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 IGHV4-34P06331 123 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OPN1MW2P0DN77 364 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OPN1MW3P0DN78 364 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CCDC130P13994 396 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 MGMTP16455 207 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CRISP2P16562 243 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ANXA13P27216 316 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CD1CP29017 333 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 HTR1FP30939 366 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 SHMT2P34897 504 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 BTCP35070 178 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FDFT1P37268 417 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 RBMXP38159 391 aaKnown RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ARRB1P49407 418 aaPredicted RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ATP1B3P54709 279 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CDH4P55283 916 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 PKNOX1P55347 436 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 TAS2R19P59542 299 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 TIMM10P62072 90 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 RPL23AP62750 156 aaKnown RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OGDHQ02218 1023 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FGL1Q08830 312 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 PPIL2Q13356 520 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 OR5I1Q13606 314 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 GNMTQ14749 295 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 NSDHLQ15738 373 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 MPPED2Q15777 294 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 NRF1Q16656 503 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 DMRTC1Q5HYR2 192 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 C6orf226Q5I0X4 101 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 TIGD3Q6B0B8 471 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ACP7Q6ZNF0 438 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM43BQ6ZT52 329 aaPredicted RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 SLC25A48Q6ZT89 311 aaKnown RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 PGAP1Q75T13 922 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 MFSD6LQ8IWD5 586 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 VN1R2Q8NFZ6 395 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 DCUN1D4Q92564 292 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FGF11Q92914 225 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM104AQ969W3 186 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CLCC1Q96S66 551 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 MBOAT4Q96T53 435 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ZBTB18Q99592 522 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 COPS8Q99627 209 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 GON7Q9BXV9 100 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 RBKSQ9H477 322 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ANKRD19PQ9H560 264 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 NARFLQ9H6Q4 476 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 AZI2Q9H6S1 392 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 ASB8Q9H765 288 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 EML4Q9HC35 981 aaKnown RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 IL26Q9NPH9 171 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CCL28Q9NRJ3 127 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 HYPKQ9NX55 129 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 HOXC10Q9NYD6 342 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 MTRF1LQ9UGC7 380 aaKnown RBP1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 CLEC4AQ9UMR7 237 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 COPS3Q9UNS2 423 aa1.23□□□□□ -2.21
NUCKS1-202ENST00000464938 PRG3Q9Y2Y8 225 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms