RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 RNF14Q9UBS8 474 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 MRPS33Q9Y291 106 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NEUROG3Q9Y4Z2 214 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 ALG6Q9Y672 507 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 MAD1L1Q9Y6D9 718 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 COMMD3-BMI1R4GMX3 469 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NVLO15381 856 aaKnown RBP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 PRKYO43930 277 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 NMT2O60551 498 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 OTCP00480 354 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 KRT14P02533 472 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 TROVE2P10155 538 aaKnown RBP eCLIP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 SLC2A3P11169 496 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 DBTP11182 482 aaKnown RBP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 COX7A1P24310 79 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 YWHABP31946 246 aaKnown RBP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 NUDT1P36639 197 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 HSD17B2P37059 387 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 PRKXP51817 358 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 PRMT2P55345 433 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 EWSR1Q01844 656 aaKnown RBP eCLIP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 C1orf146Q5VVC0 180 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 TTC19Q6DKK2 380 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 BLOC1S2Q6QNY1 142 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 IGFL3Q6UXB1 125 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 BIVMQ86UB2 503 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 DHRSXQ8N5I4 330 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 CLDN19Q8N6F1 224 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF740Q8NDX6 193 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 SLC2A14Q8TDB8 520 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 FAM210AQ96ND0 272 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 SLC35A5Q9BS91 424 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 NXF3Q9H4D5 531 aaKnown RBP3.74□□□□□ -1.81
PTCD3-205ENST00000464541 SPATA7Q9P0W8 599 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 KLK12Q9UKR0 248 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 KIAA1257Q9ULG3 409 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 TNIKQ9UKE5 1360 aa3.74□□□□□ -1.81
PTCD3-205ENST00000464541 ASTN1O14525 1302 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 CENPJQ9HC77 1338 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 OR52A4PA6NMU1 304 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF879B4DU55 563 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 NPIPA7E9PJI5 369 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 DNALI1O14645 258 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 SNNO75324 88 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 NPIPA8P0DM63 369 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF44P15621 663 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 PLA2G16P53816 162 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 HADHBP55084 474 aaKnown RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 EIF3EP60228 445 aaKnown RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 SPANXN2Q5MJ10 180 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 C11orf71Q6IPW1 123 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 FAM71F2Q6NXP2 309 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 GDPD3Q7L5L3 318 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 SPATA24Q86W54 205 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 FAM71E2Q8N5Q1 922 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 COMMD1Q8N668 190 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 OR8J1Q8NGP2 316 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 RPL3LQ92901 407 aaKnown RBP3.73□□□□□ -1.81
PTCD3-205ENST00000464541 MCUR1Q96AQ8 359 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 PGLYRP4Q96LB8 373 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 C12orf66Q96MD2 445 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 KLHDC3Q9BQ90 382 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 GON7Q9BXV9 100 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 SLC25A22Q9H936 323 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 CALHM2Q9HA72 323 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 MEAF6Q9HAF1 191 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 PLGRKTQ9HBL7 147 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF225Q9UK10 706 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 NPIPA1Q9UND3 350 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 ASF1AQ9Y294 204 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 OR10H1Q9Y4A9 318 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 CACNG2Q9Y698 323 aa3.73□□□□□ -1.81
PTCD3-205ENST00000464541 ATP10DQ9P241 1426 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 RSPH10B2B2RC85 870 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 CHMP2AO43633 222 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 MBD3O95983 291 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NDUFB10O96000 172 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 INSP01308 110 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 RSPH10BP0C881 870 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NEFHP12036 1026 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NT5EP21589 574 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 PRKACBP22694 351 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 OR1G1P47890 313 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 CSNK1DP48730 415 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 FGL1Q08830 312 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 KLF17Q5JT82 389 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-205ENST00000464541 ACOT7LQ6ZUV0 252 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-205ENST00000464541 PAQR7Q86WK9 346 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 KIR3DL3Q8N743 410 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 TRIML2Q8N7C3 387 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 SPATA4Q8NEY3 305 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 OR9K2Q8NGE7 335 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 RAB3IL1Q8TBN0 382 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 SPRYD4Q8WW59 207 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-205ENST00000464541 ITFG2Q969R8 447 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 CHP1Q99653 195 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms