RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SELENONQ9NZV5 590 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 NDRG3Q9UGV2 375 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 APCP25054 2843 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 A0A0B4J2E0 115 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 A0A1B0GX12 115 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 SH3D21A4FU49 640 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 ZNF716A6NP11 495 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 ZNF724A8MTY0 619 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 DNPH1O43598 174 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 AKR7A3O95154 331 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 PNMTP11086 282 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 HOXB6P17509 224 aaKnown RBP15.12■□□□□ 0.01
VPS52-215ENST00000464425 FLOT2Q14254 428 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 GALNT5Q7Z7M9 940 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 P3H2Q8IVL5 708 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 FAM86B1Q8N7N1 296 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 TMEM99Q8N816 258 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 PIGXQ8TBF5 258 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 STK35Q8TDR2 534 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 ADAMTS16Q8TE57 1224 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 SLC25A36Q96CQ1 311 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 SLC47A1Q96FL8 570 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 C7orf34Q96L11 122 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 LURAP1Q96LR2 239 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 DACH2Q96NX9 599 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 WFIKKN1Q96NZ8 548 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 MAGIXQ9H6Y5 334 aa15.12■□□□□ 0.01
VPS52-215ENST00000464425 IGKV3D-15A0A087WSY6 115 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 TRAPPC13A5PLN9 417 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 NPIPB7O75200 414 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 OR5F1O95221 314 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 AHSA1O95433 338 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 THRBP10828 461 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 UMPSP11172 480 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 ITGA2P17301 1181 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 EDNRAP25101 427 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 CCKARP32238 428 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 RPS5P46782 204 aaKnown RBP15.11■□□□□ 0.01
VPS52-215ENST00000464425 PCYT1AP49585 367 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 CDH12P55289 794 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 EGR4Q05215 589 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 PDK3Q15120 406 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 OTUD3Q5T2D3 398 aaPredicted RBP15.11■□□□□ 0.01
VPS52-215ENST00000464425 PAQR6Q6TCH4 344 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 LINC00114Q6XXX2 140 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 DEF8Q6ZN54 512 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 UTP4Q969X6 686 aaKnown RBP15.11■□□□□ 0.01
VPS52-215ENST00000464425 KTI12Q96EK9 354 aaPredicted RBP15.11■□□□□ 0.01
VPS52-215ENST00000464425 IL1RAPQ9NPH3 570 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 EMC3Q9P0I2 261 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 PRSS50Q9UI38 385 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 FREM1Q5H8C1 2179 aa15.11■□□□□ 0.01
VPS52-215ENST00000464425 A0A087WUJ7 227 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 CPSF4LA6NMK7 179 aaKnown RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 A6NNC1 897 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 CASKO14936 926 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 CHP2O43745 196 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 CTAG2O75638 210 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 PTNP21246 168 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 IFNA8P32881 189 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 NTF4P34130 210 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 OR3A2P47893 321 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 TAS2R41P59536 307 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 PIN1Q13526 163 aaPredicted RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 DAZAP2Q15038 168 aaPredicted RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 STAC2Q6ZMT1 411 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 PIWIL3Q7Z3Z3 882 aaKnown RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 TSEN54Q7Z6J9 526 aaKnown RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 TSPYL5Q86VY4 417 aaPredicted RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 CXorf67Q86X51 503 aaPredicted RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 ZNF100Q8IYN0 542 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 ZC3HAV1LQ96H79 300 aaKnown RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 MPP4Q96JB8 637 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 PRRC1Q96M27 445 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 MED18Q9BUE0 208 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 PTDSS2Q9BVG9 487 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 FANCFQ9NPI8 374 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 NDUFAF4Q9P032 175 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 RIMS3Q9UJD0 308 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 A4GNTQ9UNA3 340 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 NOSIPQ9Y314 301 aaKnown RBP15.1■□□□□ 0.01
VPS52-215ENST00000464425 TESMINQ9Y4I5 508 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 ENPP4Q9Y6X5 453 aa15.1■□□□□ 0.01
VPS52-215ENST00000464425 TEX15Q9BXT5 2789 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 IGKV1D-42A0A075B6H8 117 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 TCRBV3S1A0A5B6 114 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 LYPD3O95274 346 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 ADAP00813 363 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 IGHV3-9P01782 118 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 THY1P04216 161 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 RHCEP18577 417 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 SLC16A1P53985 500 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 VLDLRP98155 873 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 TSC22D1Q15714 1073 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 IQCCQ4KMZ1 466 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 FAM98BQ52LJ0 330 aaKnown RBP15.09■□□□□ 0.01
VPS52-215ENST00000464425 FBXW10Q5XX13 1052 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 TMEM225Q6GV28 225 aa15.09■□□□□ 0.01
VPS52-215ENST00000464425 C5orf46Q6UWT4 87 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms