RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 PLK3Q9H4B4 646 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 PNPOQ9NVS9 261 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 AIG1Q9NVV5 245 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 ARPC4-TTLL3A0A0A6YYG9 625 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 A8MVM7 634 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 PDE5AO76074 875 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 VAMP5O95183 116 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 TGFAP01135 160 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 IGLV1-44P01699 117 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 CECR9P0C854 216 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 ZNF23P17027 643 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 CALCRP30988 508 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 UBE2NP61088 152 aaKnown RBP19.65■□□□□ 0.74
USP4-208ENST00000464168 TUBA1BP68363 451 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 TUBA4AP68366 448 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 WBP2NLQ6ICG8 309 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 ZNF836Q6ZNA1 936 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 TUBA1AQ71U36 451 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 OR52P1PQ8NH57 321 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 MAGEE2Q8TD90 523 aaPredicted RBP19.65■□□□□ 0.74
USP4-208ENST00000464168 ALKBH3Q96Q83 286 aaPredicted RBP19.65■□□□□ 0.74
USP4-208ENST00000464168 SOX7Q9BT81 388 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 TAPBPLQ9BX59 468 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 BPESC1Q9GZL8 116 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 SEC61A2Q9H9S3 476 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 DSPPQ9NZW4 1301 aa19.65■□□□□ 0.74
USP4-208ENST00000464168 A0A096LPE4 126 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 A0A1W2PPZ6 126 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 OR6C65A6NJZ3 312 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 FRS3O43559 492 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 NPIPB7O75200 414 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 UPK3AO75631 287 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 PRG2P13727 222 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 HNF1AP20823 631 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 BGNP21810 368 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 MVDP53602 400 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 COPZ1P61923 177 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 C3orf36Q3SXR2 165 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 C1orf140Q5VVS0 124 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 NIPAL3Q6P499 406 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 VHLLQ6RSH7 139 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 KIRREL3Q8IZU9 778 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 CLIP4Q8N3C7 705 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 ZNF540Q8NDQ6 660 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 ZNF317Q96PQ6 595 aaPredicted RBP19.64■□□□□ 0.73
USP4-208ENST00000464168 NELFAQ9H3P2 528 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 SLC6A13Q9NSD5 602 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 RASD1Q9Y272 281 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 GPR45Q9Y5Y3 372 aa19.64■□□□□ 0.73
USP4-208ENST00000464168 SDHDO14521 159 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 KRT75O95678 551 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 C8BP07358 591 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 TFPTP0C1Z6 253 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 PPOXP50336 477 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 IDH3GP51553 393 aaPredicted RBP19.63■□□□□ 0.73
USP4-208ENST00000464168 HGFACQ04756 655 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 LRRC74AQ0VAA2 488 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 MPP2Q14168 576 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 LIN52Q52LA3 116 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 PRAMEF8Q5VWM4 474 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 PRAMEF7Q5VXH5 474 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 FAM169BQ8N8A8 192 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 OR4F15Q8NGB8 312 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 LINC00470Q9BZP3 86 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 SSU72Q9NP77 194 aaKnown RBP19.63■□□□□ 0.73
USP4-208ENST00000464168 CHST2Q9Y4C5 530 aa19.63■□□□□ 0.73
USP4-208ENST00000464168 TM9SF1O15321 606 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 STAMBPO95630 424 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 HOXB1P14653 301 aaPredicted RBP19.62■□□□□ 0.73
USP4-208ENST00000464168 STX3Q13277 289 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 CR1LQ2VPA4 569 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 SLC38A5Q8WUX1 472 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 RAB1BQ9H0U4 201 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 P2RX2Q9UBL9 471 aa19.62■□□□□ 0.73
USP4-208ENST00000464168 ZNF443Q9Y2A4 671 aaPredicted RBP19.62■□□□□ 0.73
USP4-208ENST00000464168 LRP5LA4QPB2 252 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 TMEM229AB2RXF0 380 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 FTCDNL1E5RQL4 147 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 RFXANKO14593 260 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 IGKV3-15P01624 115 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 ETFAP13804 333 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 GIFP27352 417 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 ROR2Q01974 943 aaKnown RBP19.61■□□□□ 0.73
USP4-208ENST00000464168 SQLEQ14534 574 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 ZSWIM7Q19AV6 140 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 KRT71Q3SY84 523 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 RNF220Q5VTB9 566 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 MYPOPQ86VE0 399 aaPredicted RBP19.61■□□□□ 0.73
USP4-208ENST00000464168 KDM8Q8N371 416 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 NUP37Q8NFH4 326 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 MFSD8Q8NHS3 518 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 STK35Q8TDR2 534 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 DOK1Q99704 481 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 CALML5Q9NZT1 146 aa19.61■□□□□ 0.73
USP4-208ENST00000464168 A0A096LPI6 279 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 HAX1O00165 279 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 ZNF432O94892 652 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 CELA3BP08861 270 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 NCF2P19878 526 aaPredicted RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 THBS4P35443 961 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms