RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ALPK1Q96QP1 1244 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 ECSITQ9BQ95 431 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 GMPR2Q9P2T1 348 aaKnown RBP11.42□□□□□ -0.58
XRN1-203ENST00000463916 EDARQ9UNE0 448 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 CADP27708 2225 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 MED13LQ71F56 2210 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 DPRXA6NFQ7 191 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 C8BP07358 591 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 GGT1P19440 569 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 NCALDP61601 193 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 LTBQ06643 244 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
XRN1-203ENST00000463916 CCDC80Q76M96 950 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 PATL1Q86TB9 770 aaKnown RBP11.42□□□□□ -0.58
XRN1-203ENST00000463916 VANGL1Q8TAA9 524 aaPredicted RBP11.42□□□□□ -0.58
XRN1-203ENST00000463916 RNF217Q8TC41 542 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 TMEM45BQ96B21 275 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 MCHR1Q99705 422 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 ELAC2Q9BQ52 826 aaKnown RBP11.42□□□□□ -0.58
XRN1-203ENST00000463916 TMEM27Q9HBJ8 222 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 PARPBPQ9NWS1 579 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 NPAP1Q9NZP6 1156 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
XRN1-203ENST00000463916 ACANP16112 2415 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 A0A1W2PR80 420 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 OR5H1A6NKK0 313 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 LRRN3E7EW58 273 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 M0R082 166 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 SLC22A2O15244 555 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 FZD7O75084 574 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 LYPD3O95274 346 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 TNFRSF1BP20333 461 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 SELENOPP49908 381 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 PPA1Q15181 289 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 GABRA6Q16445 453 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 ENTPD8Q5MY95 495 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 TIMM23BQ5SRD1 257 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 LINC00114Q6XXX2 140 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 WDR88Q6ZMY6 472 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 AAED1Q7RTV5 226 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 RANBP3LQ86VV4 465 aaPredicted RBP11.41□□□□□ -0.58
XRN1-203ENST00000463916 SLC30A8Q8IWU4 369 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 ZNF417Q8TAU3 575 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 NEUROG1Q92886 237 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 ZNF587Q96SQ5 575 aaPredicted RBP11.41□□□□□ -0.58
XRN1-203ENST00000463916 TAS2R16Q9NYV7 291 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
XRN1-203ENST00000463916 MTORP42345 2549 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 ZFHX3Q15911 3703 aa11.41□□□□□ -0.58
XRN1-203ENST00000463916 TRAV36DV7A0A075B6V5 113 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 CPSF4LA6NMK7 179 aaKnown RBP11.4□□□□□ -0.58
XRN1-203ENST00000463916 COX4I1P13073 169 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 GRPRP30550 384 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 NR1H2P55055 460 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 ADAM8P78325 824 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 BSPH1Q075Z2 132 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 FAM69AQ5T7M9 428 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 INTS11Q5TA45 600 aaKnown RBP11.4□□□□□ -0.58
XRN1-203ENST00000463916 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 OR52N5Q8NH56 324 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 RP9Q8TA86 221 aaKnown RBP11.4□□□□□ -0.58
XRN1-203ENST00000463916 MUS81Q96NY9 551 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 MOGAT1Q96PD6 335 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 USB1Q9BQ65 265 aaKnown RBP11.4□□□□□ -0.58
XRN1-203ENST00000463916 GID8Q9NWU2 228 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 CMTM6Q9NX76 183 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 UPB1Q9UBR1 384 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 RASD1Q9Y272 281 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 DSCAMO60469 2012 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 CIB4A0PJX0 185 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 AIM2O14862 343 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 FMO6PO60774 539 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 VAMP5O95183 116 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 VEZF1Q14119 521 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 ZNF613Q6PF04 617 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 LINGO2Q7L985 606 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 SPATA21Q7Z572 469 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 SLC26A7Q8TE54 656 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 ADAMTS16Q8TE57 1224 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 IGFBPL1Q8WX77 278 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 FAM107BQ9H098 131 aa11.4□□□□□ -0.58
XRN1-203ENST00000463916 ALPK2Q86TB3 2170 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 MS4A18H0YCH9 400 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 OR2T1O43869 369 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 CCDC22O60826 627 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SHOX2O60902 331 aaPredicted RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 HPRP00739 348 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 BGLAPP02818 100 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 DRD4P21917 467 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 HOXC12P31275 282 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 MS4A18Q3C1V0 323 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SLC15A3Q8IY34 581 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 WDR31Q8NA23 367 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 AKAP1Q92667 903 aaKnown RBP eCLIP11.39□□□□□ -0.59
XRN1-203ENST00000463916 MUCL1Q96DR8 90 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms