RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ARR3P36575 388 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 ARFIP2P53365 341 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 SH3BGRP55822 239 aaPredicted RBP12.49□□□□□ -0.41
SMC1A-204ENST00000463684 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
SMC1A-204ENST00000463684 C6orf136Q5SQH8 315 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 FRRS1Q6ZNA5 592 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 CREB3L2Q70SY1 520 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 CMIPQ8IY22 773 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 CLECL1Q8IZS7 167 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 RAB8BQ92930 207 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 TREM2Q9NZC2 230 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 REV1Q9UBZ9 1251 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 MGAM2Q2M2H8 2515 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 TMPRSS2O15393 492 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 PNPP00491 289 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 CHRNGP07510 517 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 IGFBP1P08833 259 aaPredicted RBP12.48□□□□□ -0.41
SMC1A-204ENST00000463684 CELA3BP08861 270 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 GAAP10253 952 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 ACHEP22303 614 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 COL8A2P25067 703 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 EVX1P49640 407 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM33P57088 247 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 DEFA6Q01524 100 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 ROR2Q01974 943 aaKnown RBP12.48□□□□□ -0.41
SMC1A-204ENST00000463684 NPRL3Q12980 569 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
SMC1A-204ENST00000463684 GNA13Q14344 377 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 GSTA3Q16772 222 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 ELFN2Q5R3F8 820 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 REP15Q6BDI9 236 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 OR4F3Q6IEY1 312 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 KRT80Q6KB66 452 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 TNFAIP8L2Q6P589 184 aaPredicted RBP12.48□□□□□ -0.41
SMC1A-204ENST00000463684 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 AGR3Q8TD06 166 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 RDH5Q92781 318 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 ZNF747Q9BV97 191 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 LINC00470Q9BZP3 86 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 PCDHGB1Q9Y5G3 927 aa12.48□□□□□ -0.41
SMC1A-204ENST00000463684 CFAP73A6NFT4 308 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 M0R233 179 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 FAAHO00519 579 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 RNASET2O00584 256 aaKnown RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 UPK3AO75631 287 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 BCL10O95999 233 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 UQCRC2P22695 453 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 ARF1P84077 181 aaKnown RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 MYBPC1Q00872 1141 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 PLAURQ03405 335 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 MAD2L1Q13257 205 aaPredicted RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 XKR7Q5GH72 579 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 ZCCHC23Q6ZST2 131 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 CARM1Q86X55 608 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 NOA1Q8NC60 698 aaKnown RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
SMC1A-204ENST00000463684 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 SLC52A3Q9NQ40 469 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
SMC1A-204ENST00000463684 LOC105371242A0A075B767 164 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 PPIHO43447 177 aaKnown RBP12.46□□□□□ -0.41
SMC1A-204ENST00000463684 NPHS1O60500 1241 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 CHRM4P08173 479 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 G6PDP11413 515 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 IL7RP16871 459 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 TCN1P20061 433 aaPredicted RBP12.46□□□□□ -0.41
SMC1A-204ENST00000463684 NR4A1P22736 598 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 CAPZA2P47755 286 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 CLDN8P56748 225 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 FUT5Q11128 374 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 FOXL1Q12952 345 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 PCLAFQ15004 111 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 PRAMEF8Q5VWM4 474 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 PRAMEF7Q5VXH5 474 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
SMC1A-204ENST00000463684 TUBGCP3Q96CW5 907 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 C3orf30Q96M34 536 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 DPY30Q9C005 99 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 NOX3Q9HBY0 568 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 PRDM4Q9UKN5 801 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 NOX1Q9Y5S8 564 aa12.46□□□□□ -0.41
SMC1A-204ENST00000463684 AGAP5A6NIR3 686 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 A8MVM7 634 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 WNT9BO14905 357 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 SLC43A1O75387 559 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms