RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 PIP5K1AQ99755 562 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 PRSS27Q9BQR3 290 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 LRMDAQ9H2I8 198 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FKRPQ9H9S5 495 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 SLC24A3Q9HC58 644 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 IL1RAPQ9NPH3 570 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 KRCC1Q9NPI7 259 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 NANSQ9NR45 359 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 PLSCR4Q9NRQ2 329 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 NDUFAF4Q9P032 175 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 NOSIPQ9Y314 301 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 SPTBN1Q01082 2364 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 DOPEY2Q9Y3R5 2298 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 hCG_2039718K7EN88 272 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 KPNA4O00629 521 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-204ENST00000463487 FZD7O75084 574 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 MT-ND1P03886 318 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 H1F0P07305 194 aaKnown RBP17.62■□□□□ 0.41
COL9A3-204ENST00000463487 PTNP21246 168 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 MS4A2Q01362 244 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 IL1RL1Q01638 556 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 CHRNB3Q05901 458 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 CDSNQ15517 529 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 PGM2L1Q6PCE3 622 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 H1FNTQ75WM6 255 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-204ENST00000463487 ZDHHC21Q8IVQ6 265 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 NKAIN4Q8IVV8 208 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 CCDC103Q8IW40 242 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 CDK20Q8IZL9 346 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 TMEM255BQ8WV15 326 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 RBM24Q9BX46 236 aaKnown RBP17.62■□□□□ 0.41
COL9A3-204ENST00000463487 CADM1Q9BY67 442 aaKnown RBP17.62■□□□□ 0.41
COL9A3-204ENST00000463487 C12orf49Q9H741 205 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 PARPBPQ9NWS1 579 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 JKAMPQ9P055 326 aa17.62■□□□□ 0.41
COL9A3-204ENST00000463487 A0A1W2PRQ8 180 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 AQP12BA6NM10 295 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF716A6NP11 495 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 A8MXE2 369 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 J3KTA2 159 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 M0R082 166 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 OR6A2O95222 327 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 BGLAPP02818 100 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 UMPSP11172 480 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 GRPRP30550 384 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 UQCRC1P31930 480 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 VLDLRP98155 873 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 FOXD4Q12950 439 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 PMS2P3Q13401 168 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 DGCR6Q14129 220 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 SLC17A1Q14916 467 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF74Q16587 644 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 FGD3Q5JSP0 725 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF730Q6ZMV8 503 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 BEND4Q6ZU67 534 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 AQP12AQ8IXF9 295 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF100Q8IYN0 542 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 RNF113BQ8IZP6 322 aaKnown RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF417Q8TAU3 575 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ACOT11Q8WXI4 607 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 SGTBQ96EQ0 304 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF587Q96SQ5 575 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 SEPHS2Q99611 448 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 NMNAT1Q9HAN9 279 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 MRPL39Q9NYK5 338 aaKnown RBP17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ELOVL5Q9NYP7 299 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 RHCGQ9UBD6 479 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF229Q9UJW7 825 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 CACNA1CQ13936 2221 aa17.61■□□□□ 0.41
COL9A3-204ENST00000463487 ENO4A6NNW6 628 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 ACOT8O14734 319 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 FFAR1O14842 300 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 AKAP8O43823 692 aaKnown RBP17.6■□□□□ 0.41
COL9A3-204ENST00000463487 MRPL33O75394 65 aaKnown RBP17.6■□□□□ 0.41
COL9A3-204ENST00000463487 CH25HO95992 272 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 SEMG1P04279 462 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF43P17038 809 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 KLK2P20151 261 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 CBLP22681 906 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 C1DQ13901 141 aaKnown RBP17.6■□□□□ 0.41
COL9A3-204ENST00000463487 POU4F3Q15319 338 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 PIK3C3Q8NEB9 887 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 OR9K2Q8NGE7 335 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 OR5J2Q8NH18 312 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 OPN3Q9H1Y3 402 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-204ENST00000463487 POMPQ9Y244 141 aa17.6■□□□□ 0.41
COL9A3-204ENST00000463487 TCRBV5S2A0A599 114 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF814B7Z6K7 855 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 CIB2O75838 187 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 PRSS23O95084 383 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 GADD45GO95257 159 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 CGAP01215 116 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 PCYT1AP49585 367 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 UGT2B15P54855 530 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 SORDQ00796 357 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 SPIBQ01892 262 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 TFF3Q07654 80 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 PUDPQ08623 228 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 NANOGNBQ7Z5D8 188 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 SPATA24Q86W54 205 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms