RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 DSTNP60981 165 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 SWI5Q1ZZU3 235 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 CEP85LQ5SZL2 805 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 NIPAL3Q6P499 406 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 ZNF836Q6ZNA1 936 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 VRK2Q86Y07 508 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 OR1K1Q8NGR3 316 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 C3orf49Q96BT1 292 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 CA10Q9NS85 328 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
SKA3-204ENST00000462482 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 STAB1Q9NY15 2570 aa13.43□□□□□ -0.26
SKA3-204ENST00000462482 FBN1P35555 2871 aaKnown RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 CHD3Q12873 2000 aaKnown RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 IGHV1-18A0A0C4DH31 117 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 A0A0G2JPF8 293 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 LOC390937A0A1W2PQ73 354 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 HNRNPCL2B2RXH8 293 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 HNRNPCL3B7ZW38 293 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 FRS3O43559 492 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 HNRNPCL1O60812 293 aaKnown RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 PDE5AO76074 875 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 LY6HO94772 140 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 C1QCP02747 245 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 HNRNPCL4P0DMR1 293 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ETFAP13804 333 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 EPHA3P29320 983 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 IL12AP29459 219 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 NR4A2P43354 598 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 BNIP2Q12982 314 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 RNF220Q5VTB9 566 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ANKRD16Q6P6B7 361 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 VHLLQ6RSH7 139 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 CREB3L2Q70SY1 520 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ANKRD42Q8N9B4 389 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 OR4F15Q8NGB8 312 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 STK35Q8TDR2 534 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 SLC25A36Q96CQ1 311 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ITCHQ96J02 903 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 SORCS2Q96PQ0 1159 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ALKBH3Q96Q83 286 aaPredicted RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 SPATA9Q9BWV2 254 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 RAB1BQ9H0U4 201 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 WDR55Q9H6Y2 383 aaPredicted RBP13.42□□□□□ -0.26
SKA3-204ENST00000462482 CHODLQ9H9P2 273 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 THAP1Q9NVV9 213 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
SKA3-204ENST00000462482 ARPC4-TTLL3A0A0A6YYG9 625 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 OR4A8P0C604 315 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 ZCCHC18P0CG32 403 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 ZNF43P17038 809 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 THBS2P35442 1172 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 ACAA2P42765 397 aaKnown RBP13.41□□□□□ -0.26
SKA3-204ENST00000462482 SELENOPP49908 381 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
SKA3-204ENST00000462482 MST1LQ2TV78 715 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 C3orf36Q3SXR2 165 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 PDCD4Q53EL6 469 aaKnown RBP13.41□□□□□ -0.26
SKA3-204ENST00000462482 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 ATG16L1Q676U5 607 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 MFSD8Q8NHS3 518 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 MAGEE2Q8TD90 523 aaPredicted RBP13.41□□□□□ -0.26
SKA3-204ENST00000462482 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
SKA3-204ENST00000462482 LINC00470Q9BZP3 86 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 RAD21L1Q9H4I0 556 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 TPT1P8Q9HAU6 139 aa13.41□□□□□ -0.26
SKA3-204ENST00000462482 DSPPQ9NZW4 1301 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 A0A096LPE4 126 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 A0A1W2PPZ6 126 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 C5orf58C9J3I9 102 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 AKAP8O43823 692 aaKnown RBP13.4□□□□□ -0.26
SKA3-204ENST00000462482 SLC43A1O75387 559 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 KITP10721 976 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
SKA3-204ENST00000462482 NAAAQ02083 359 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 ZNF311Q5JNZ3 666 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 MSANTD1Q6ZTZ1 278 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 SLC38A5Q8WUX1 472 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 TMEM19Q96HH6 336 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 FOXN4Q96NZ1 517 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 ZIM2Q9NZV7 527 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 RCE1Q9Y256 329 aa13.4□□□□□ -0.26
SKA3-204ENST00000462482 FREM1Q5H8C1 2179 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 ABCA1O95477 2261 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 CADP27708 2225 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 OR2T1O43869 369 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 PRG2P13727 222 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 PPOXP50336 477 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 IDH3GP51553 393 aaPredicted RBP13.39□□□□□ -0.27
SKA3-204ENST00000462482 CLDN17P56750 224 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 MPP2Q14168 576 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 EFNB3Q15768 340 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms