RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 HSPB1P04792 205 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 SLC2A3P11169 496 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 POLR2EP19388 210 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 QARSP47897 775 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 ATP1B3P54709 279 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 DIO3P55073 304 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 RIPK4P57078 832 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 SEC61GP60059 68 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 BOLA3Q53S33 107 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 SAMD4BQ5PRF9 694 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 UNQ9370/PRO34162Q6UXP9 181 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 HSDL2Q6YN16 418 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 ACOT7LQ6ZUV0 252 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 VRK2Q86Y07 508 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 FBXO16Q8IX29 292 aaPredicted RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 CCDC65Q8IXS2 484 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 CNPY4Q8N129 248 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 UBE2J2Q8N2K1 259 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 CATSPER1Q8NEC5 780 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 OR10H4Q8NGA5 316 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 OR2AP1Q8NGE2 309 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 OR8J1Q8NGP2 316 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 MAGEE2Q8TD90 523 aaPredicted RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 SCFD1Q8WVM8 642 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 C10orf35Q96D05 121 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 IFT74Q96LB3 600 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 MTMR9Q96QG7 549 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 MAPKAP1Q9BPZ7 522 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 KLHDC3Q9BQ90 382 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 RNF126Q9BV68 326 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 NIPAL2Q9H841 368 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 SH2D2AQ9NP31 389 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 CD274Q9NZQ7 290 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 UBQLN1Q9UMX0 589 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 IFT52Q9Y366 437 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 LRRK1Q38SD2 2015 aa2.76□□□□□ -1.97
CLK1-206ENST00000461326 ZC3H13Q5T200 1668 aaKnown RBP2.76□□□□□ -1.97
CLK1-206ENST00000461326 CAMSAP1Q5T5Y3 1602 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RNF17Q9BXT8 1623 aaKnown RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 ANKRD30AQ9BXX3 1397 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 KDM5DQ9BY66 1539 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 IGHV3OR16-13A0A075B7E8 117 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 IGHV1OR21-1A0A087WYE8 117 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 TUBAL3A6NHL2 446 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 VSTM2BA6NLU5 285 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ZFP92A6NM28 416 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 K7N7A8 449 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ZNF264O43296 627 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 BBOX1O75936 387 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ATP5LO75964 103 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PCMT1P22061 227 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 CMA1P23946 247 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 HMGB2P26583 209 aaKnown RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 AQP1P29972 269 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 KIR2DS4P43632 304 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 GYG1P46976 350 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 OR3A4PP47883 348 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ACTR3P61158 418 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 TLE4Q04727 773 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 VGLL4Q14135 290 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 GRB7Q14451 532 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 MICBQ29980 383 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RABL6Q3YEC7 729 aaPredicted RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 PARP15Q460N3 678 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 OR52E8Q6IFG1 317 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PGAP1Q75T13 922 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 TRIM69Q86WT6 500 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 EGFL6Q8IUX8 553 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 FTMTQ8N4E7 242 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ALLCQ8N6M5 410 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 OR51S1Q8NGJ8 323 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 UFD1Q92890 307 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 FBXO32Q969P5 355 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 TUBGCP3Q96CW5 907 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PGLYRP4Q96LB8 373 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RNF2Q99496 336 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 EBF4Q9BQW3 602 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RBKSQ9H477 322 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 SUDS3Q9H7L9 328 aaPredicted RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 FOLH1BQ9HBA9 442 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PLGRKTQ9HBL7 147 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PRR34Q9NV39 138 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 SUN2Q9UH99 717 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ZNF639Q9UID6 485 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RABL2BQ9UNT1 228 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PEX16Q9Y5Y5 336 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ADGRL2O95490 1459 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RAI1Q7Z5J4 1906 aaPredicted RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 GCC2Q8IWJ2 1684 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PTPRKQ15262 1439 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 ERBINQ96RT1 1412 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 CNTLNQ9NXG0 1405 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 RRBP1Q9P2E9 1410 aaKnown RBP2.75□□□□□ -1.97
CLK1-206ENST00000461326 MROH1Q8NDA8 1641 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 MYO3AQ8NEV4 1616 aa2.75□□□□□ -1.97
CLK1-206ENST00000461326 PPIAL4EA0A075B759 164 aa2.74□□□□□ -1.97
CLK1-206ENST00000461326 XKRY2A2RUG3 117 aa2.74□□□□□ -1.97
CLK1-206ENST00000461326 E7ENQ6 273 aa2.74□□□□□ -1.97
CLK1-206ENST00000461326 DCTN6O00399 190 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms