RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MPGP29372 298 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 NTF4P34130 210 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 SESN3P58005 492 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 CYLC2Q14093 348 aaPredicted RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 LASP1Q14847 261 aaKnown RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 PGS1Q32NB8 556 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 AWAT1Q58HT5 328 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 EXOSC6Q5RKV6 272 aaKnown RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 DCST2Q5T1A1 773 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 CCDC121Q6ZUS5 278 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 SNX32Q86XE0 403 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 TREML1Q86YW5 311 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 ADAMTS15Q8TE58 950 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 TMEM186Q96B77 213 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF524Q96C55 264 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 SLC38A2Q96QD8 506 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 THUMPD3Q9BV44 507 aaKnown RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 KATNB1Q9BVA0 655 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 REEP4Q9H6H4 257 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 OBP2BQ9NPH6 170 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 HIF1ANQ9NWT6 349 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 USP22Q9UPT9 525 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 SLC9A8Q9Y2E8 581 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 LOC100653049A0A140TA62 436 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 CYP7B1O75881 506 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 KRT34O76011 436 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 UBOX5O94941 541 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 PMS2P2O95744 297 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 KRT16P08779 473 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 COX4I1P13073 169 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 PRDX6P30041 224 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 S100A3P33764 101 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 FRKP42685 505 aaPredicted RBP14.95□□□□□ -0.02
TOP3A-202ENST00000461127 KHKP50053 298 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 TRIP10Q15642 601 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 DPY19L1Q2PZI1 675 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 ZNF385BQ569K4 471 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 BLOC1S3Q6QNY0 202 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 SHISA2Q6UWI4 295 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 C6orf89Q6UWU4 347 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 SVOPLQ8N434 492 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 RP9Q8TA86 221 aaKnown RBP14.95□□□□□ -0.02
TOP3A-202ENST00000461127 UBASH3BQ8TF42 649 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 MTERF3Q96E29 417 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 FAM120BQ96EK7 910 aaKnown RBP14.95□□□□□ -0.02
TOP3A-202ENST00000461127 NSL1Q96IY1 281 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 TEX37Q96LM6 180 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 ACTRT3Q9BYD9 372 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 SLC7A10Q9NS82 523 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 ATAD3AQ9NVI7 634 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 ARL8BQ9NVJ2 186 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 TAGLN3Q9UI15 199 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 FAF1Q9UNN5 650 aaPredicted RBP14.95□□□□□ -0.02
TOP3A-202ENST00000461127 HDGFL3Q9Y3E1 203 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 SPEF1Q9Y4P9 236 aa14.95□□□□□ -0.02
TOP3A-202ENST00000461127 IGHV1-18A0A0C4DH31 117 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 CCDC154A6NI56 674 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 ANGPT2O15123 496 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 CFLARO15519 480 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 TBX19O60806 448 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 IL6P05231 212 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 CDH2P19022 906 aaPredicted RBP14.94□□□□□ -0.02
TOP3A-202ENST00000461127 FKBP2P26885 142 aaKnown RBP14.94□□□□□ -0.02
TOP3A-202ENST00000461127 IL12AP29459 219 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 RIN1Q13671 783 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 THSD4Q6ZMP0 1018 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 FUNDC1Q8IVP5 155 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 RIMKLAQ8IXN7 391 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 POU5F2Q8N7G0 328 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 OR7A2PQ8NGA2 310 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 OR4F15Q8NGB8 312 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 TESCQ96BS2 214 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 SPDL1Q96EA4 605 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 LAT2Q9GZY6 243 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 DYNLRB1Q9NP97 96 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 ATP6V1HQ9UI12 483 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 PCDHGB1Q9Y5G3 927 aa14.94□□□□□ -0.02
TOP3A-202ENST00000461127 NPIPB9F8W1W9 429 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 hCG_2039718K7EN88 272 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 EPHA1P21709 976 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 APOBEC1P41238 236 aaKnown RBP14.93□□□□□ -0.02
TOP3A-202ENST00000461127 MNAT1P51948 309 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 ZSCAN26Q16670 478 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 MMEL1Q495T6 779 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 HIKESHIQ53FT3 197 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 SPANXN4Q5MJ08 99 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 PDZK1Q5T2W1 519 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 TSPO2Q5TGU0 170 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 ABHD12BQ7Z5M8 362 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-202ENST00000461127 CCDC103Q8IW40 242 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 TSPEARQ8WU66 669 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 ZNF747Q9BV97 191 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 SUCNR1Q9BXA5 334 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 ACER3Q9NUN7 267 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 CHRNA9Q9UGM1 479 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 NDUFAF1Q9Y375 327 aa14.93□□□□□ -0.02
TOP3A-202ENST00000461127 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
TOP3A-202ENST00000461127 EIF1BO60739 113 aaKnown RBP14.92□□□□□ -0.02
TOP3A-202ENST00000461127 MSMBP08118 114 aa14.92□□□□□ -0.02
TOP3A-202ENST00000461127 CALB2P22676 271 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms