RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IQCF1Q8N6M8 205 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 OR13C2Q8NGS9 318 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 PAQR8Q8TEZ7 354 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 APH1BQ8WW43 257 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 LIPHQ8WWY8 451 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 THAP4Q8WY91 577 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 DDIT4LQ96D03 193 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 THOC3Q96J01 351 aaKnown RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 SAMD8Q96LT4 415 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 IL4I1Q96RQ9 567 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ANGPTL4Q9BY76 406 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 PLA2G12AQ9BZM1 189 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 UBQLN3Q9H347 655 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 SACM1LQ9NTJ5 587 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 C20orf141Q9NUB4 165 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 PSORS1C1Q9UIG5 152 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 KLHL21Q9UJP4 597 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ZNF229Q9UJW7 825 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 OSGIN1Q9UJX0 560 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 TMED7Q9Y3B3 224 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 PCDHGB1Q9Y5G3 927 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CHCHD2Q9Y6H1 151 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 LRBAP50851 2863 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 KIAA1549Q9HCM3 1950 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TRAV27A0A087WT01 109 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ETV2O00321 342 aaPredicted RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 SURF4O15260 269 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 PRODHO43272 600 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ZNF208O43345 1280 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TLX2O43763 284 aaPredicted RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 ZNF354AO60765 605 aaPredicted RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 CH25HO95992 272 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CDK1P06493 297 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CELA2AP08217 269 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 APEHP13798 732 aaKnown RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 PRKCAP17252 672 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 HK1P19367 917 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 FUT1P19526 365 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 PTNP21246 168 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ITGA3P26006 1051 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ADH6P28332 368 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 RPL4P36578 427 aaKnown RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 CYB561P49447 251 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TMED1Q13445 227 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TBCEQ15813 527 aaPredicted RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 ZNF74Q16587 644 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 NADK2Q4G0N4 442 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 SLC25A53Q5H9E4 307 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ACER2Q5QJU3 275 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 DCAF10Q5QP82 559 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 FAM69AQ5T7M9 428 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 NXNL2Q5VZ03 156 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 LAIR2Q6ISS4 152 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ACSM5Q6NUN0 579 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 C3orf33Q6P1S2 294 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 MEX3DQ86XN8 651 aaKnown RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 PLCZ1Q86YW0 608 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CCDC103Q8IW40 242 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 SPARTQ8N0X7 666 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 OR2M3Q8NG83 312 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 OR8D4Q8NGM9 314 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 OR51A7Q8NH64 312 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 ADAMTS17Q8TE56 1095 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 RORBQ92753 470 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TMEM41AQ96HV5 264 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 LRR1Q96L50 414 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 GPX7Q96SL4 187 aaPredicted RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 ASPNQ9BXN1 380 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 RTN4RQ9BZR6 473 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 LHPPQ9H008 270 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 RACGAP1Q9H0H5 632 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 GALNT9Q9HCQ5 603 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CMC2Q9NRP2 79 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CHCHD3Q9NX63 227 aaKnown RBP8.1□□□□□ -1.11
VPS50-207ENST00000458530 DNAJC27Q9NZQ0 273 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CHRNA9Q9UGM1 479 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 CORINQ9Y5Q5 1042 aa8.1□□□□□ -1.11
VPS50-207ENST00000458530 RP1L1Q8IWN7 2480 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 C2CD3Q4AC94 2353 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 IGKV1D-42A0A075B6H8 117 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 KDM4EB2RXH2 506 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 PRR23D1E9PI22 279 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 BHLHE40O14503 412 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 IMPA2O14732 288 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 PRKYO43930 277 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 GMFGO60234 142 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 ENTPD6O75354 484 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 PTP4A3O75365 173 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 OR6A2O95222 327 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 NTN1O95631 604 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 RAB36O95755 333 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms