RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZNF417Q8TAU3 575 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 TPD52L3Q96J77 140 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 ZNF583Q96ND8 569 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 ZNF587Q96SQ5 575 aaPredicted RBP16.51■□□□□ 0.23
USP39-209ENST00000458268 PTDSS2Q9BVG9 487 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 PARPBPQ9NWS1 579 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 ASB6Q9NWX5 421 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 CMTM6Q9NX76 183 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 CSMD2Q7Z408 3487 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 IGKV1D-42A0A075B6H8 117 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 TRAV36DV7A0A075B6V5 113 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 CLOCKO15516 846 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 NPIPB7O75200 414 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 RAF1P04049 648 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 GGT1P19440 569 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 FOXG1P55316 489 aaPredicted RBP16.5■□□□□ 0.23
USP39-209ENST00000458268 C1DQ13901 141 aaKnown RBP16.5■□□□□ 0.23
USP39-209ENST00000458268 FAM69AQ5T7M9 428 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 TSPO2Q5TGU0 170 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 FAM91A1Q658Y4 838 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 NIPAL3Q6P499 406 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 MICU2Q8IYU8 434 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 RASSF5Q8WWW0 418 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 EPYCQ99645 322 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 PLEKHF2Q9H8W4 249 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 EFCAB1Q9HAE3 211 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 C12orf10Q9HB07 376 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 SLC7A10Q9NS82 523 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 PRDM4Q9UKN5 801 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 SLC7A7Q9UM01 511 aa16.5■□□□□ 0.23
USP39-209ENST00000458268 A0A087WUJ7 227 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 ELOVL7A1L3X0 281 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 LRRN3E7EW58 273 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 DYNC1I1O14576 645 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 OR2T1O43869 369 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 SNX3O60493 162 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 PLAUP00749 431 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 C8BP07358 591 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 OR1E2P47887 323 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 CLDN17P56750 224 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 LIPEQ05469 1076 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 C6orf89Q6UWU4 347 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 ARPINQ7Z6K5 226 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 ZNF433Q8N7K0 673 aaPredicted RBP16.49■□□□□ 0.23
USP39-209ENST00000458268 OR52N5Q8NH56 324 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 ADAMTS16Q8TE57 1224 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 MUCL1Q96DR8 90 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 SF3B5Q9BWJ5 86 aaKnown RBP16.49■□□□□ 0.23
USP39-209ENST00000458268 ASPNQ9BXN1 380 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 EVA1AQ9H8M9 152 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 BAG5Q9UL15 447 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 RASD1Q9Y272 281 aa16.49■□□□□ 0.23
USP39-209ENST00000458268 FTCDNL1E5RQL4 147 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 KLF4O43474 513 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 IFNA14P01570 189 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 ZNF43P17038 809 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 SELENOPP49908 381 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 CRYBA2P53672 197 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 LGALS3BPQ08380 585 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 PPA1Q15181 289 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 CYBRD1Q53TN4 286 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 ZNF613Q6PF04 617 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 C5orf46Q6UWT4 87 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 CCDC80Q76M96 950 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 HSD17B8Q92506 261 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 CMTM5Q96DZ9 223 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 ALKBH3Q96Q83 286 aaPredicted RBP16.48■□□□□ 0.23
USP39-209ENST00000458268 NGBQ9NPG2 151 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 TAS2R16Q9NYV7 291 aa16.48■□□□□ 0.23
USP39-209ENST00000458268 TRAPPC13A5PLN9 417 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 NME4O00746 187 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 CHP2O43745 196 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 VAMP5O95183 116 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 ZNF682O95780 498 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 COX5AP20674 150 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 HOXC12P31275 282 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 P2RY4P51582 365 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 TAS2R41P59536 307 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 PMS2P3Q13401 168 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 VEZF1Q14119 521 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 CARD17Q5XLA6 110 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 TTC33Q6PID6 262 aaPredicted RBP16.47■□□□□ 0.23
USP39-209ENST00000458268 ZNF704Q6ZNC4 412 aaPredicted RBP16.47■□□□□ 0.23
USP39-209ENST00000458268 CREB3L2Q70SY1 520 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 SLC15A3Q8IY34 581 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 ZIC4Q8N9L1 334 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 MOGAT1Q96PD6 335 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 C1QTNF6Q9BXI9 259 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 MYLK2Q9H1R3 596 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 OR10A4Q9H209 315 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 SLCO5A1Q9H2Y9 848 aa16.47■□□□□ 0.23
USP39-209ENST00000458268 CXCR6O00574 342 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 FMO6PO60774 539 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 ATE1O95260 518 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 BGLAPP02818 100 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 UMPSP11172 480 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 KDELR2P33947 212 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 ZNF83P51522 516 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 NR1H2P55055 460 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 PSME3P61289 254 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms