RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ACAA2P42765 397 aaKnown RBP13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 MUC15Q8N387 334 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 POMGNT2Q8NAT1 580 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 BBS10Q8TAM1 723 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 MAL2Q969L2 176 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 ZNF385AQ96PM9 386 aaKnown RBP13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 SF3B5Q9BWJ5 86 aaKnown RBP13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 VIPAS39Q9H9C1 493 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 TCF7L2Q9NQB0 619 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC17A5Q9NRA2 495 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 CBLN4Q9NTU7 201 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 B3GALT5Q9Y2C3 310 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 ELOA3DA6NLF2 546 aaPredicted RBP13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 ZNF587BE7ETH6 402 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 CLIC1O00299 241 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 GPRIN2O60269 458 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 NUDT7P0C024 238 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 PRPS1P60891 318 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 HOXC5Q00444 222 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 FADDQ13158 208 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 RGNQ15493 299 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 ELOA3BQ3SY89 546 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 EPGNQ6UW88 154 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 B3GLCTQ6Y288 498 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 ELOA3Q8NG57 546 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 DYDC1Q8WWB3 177 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 GTF2H4Q92759 462 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 C3orf49Q96BT1 292 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC25A36Q96CQ1 311 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 ALKBH3Q96Q83 286 aaPredicted RBP13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 RHNO1Q9BSD3 238 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 GRIP2Q9C0E4 1043 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 PAIP1Q9H074 479 aaKnown RBP13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 ZNF446Q9NWS9 450 aa13.8□□□□□ -0.2
CHCHD3-204ENST00000457942 HMGB1P1B2RPK0 211 aaPredicted RBP13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 PDLIM1O00151 329 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 VAMP5O95183 116 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 NCALDP61601 193 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC25A3Q00325 362 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 RAB35Q15286 201 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 HIKESHIQ53FT3 197 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 GCNT6Q5T4J0 391 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 NIPAL3Q6P499 406 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 RNF217Q8TC41 542 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 HTRA1Q92743 480 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 C7orf26Q96N11 449 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 C19orf24Q9BVV8 132 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 A4GALTQ9NPC4 353 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 CCDC167Q9P0B6 97 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 ABCA1O95477 2261 aa13.79□□□□□ -0.2
CHCHD3-204ENST00000457942 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 BMP4P12644 408 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 RPS5P46782 204 aaKnown RBP13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 SELENOPP49908 381 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 UBE2NP61088 152 aaKnown RBP13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 C6orf52Q5T4I8 152 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 ZNF544Q6NX49 715 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 KRT73Q86Y46 540 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 NFKBIDQ8NI38 313 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 STK35Q8TDR2 534 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 SPDL1Q96EA4 605 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 PIF1Q9H611 641 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 BCL2L10Q9HD36 194 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 SLCO1B3Q9NPD5 702 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 RASD1Q9Y272 281 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 CHST2Q9Y4C5 530 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 ALPK2Q86TB3 2170 aa13.78□□□□□ -0.2
CHCHD3-204ENST00000457942 TMEM229AB2RXF0 380 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 TGDSO95455 350 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 LGI1O95970 557 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 PNMTP11086 282 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 CHRNB3Q05901 458 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 C11orf71Q6IPW1 123 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 CREB3L2Q70SY1 520 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 EBF4Q9BQW3 602 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 SPATA5L1Q9BVQ7 753 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 INTS9Q9NV88 658 aaKnown RBP13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC13A4Q9UKG4 626 aa13.77□□□□□ -0.21
CHCHD3-204ENST00000457942 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 OR6C65A6NJZ3 312 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 ETS2P15036 469 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF43P17038 809 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 PPIBP23284 216 aaKnown RBP13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 PRKAR1BP31321 381 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 IDH3AP50213 366 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms