RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.45	□□□□□ -0.58
SNHG17-208	ENST00000456953	GIN1	Q9NXP7	522 aa		11.45	□□□□□ -0.58
SNHG17-208	ENST00000456953	PCDHB10	Q9UN67	800 aa		11.45	□□□□□ -0.58
SNHG17-208	ENST00000456953	LOC100653049	A0A140TA62	436 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	PRSS51	A0A1B0GVH4	220 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	NPIPB9	F8W1W9	429 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	RNASET2	O00584	256 aa	Known RBP	11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	ZNF264	O43296	627 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	DNPH1	O43598	174 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	RGS9	O75916	674 aa	Predicted RBP	11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	KRT34	O76011	436 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CPSF4	O95639	269 aa	Known RBP	11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	C6orf47	O95873	294 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	KHK	P50053	298 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CCR4	P51679	360 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	ATP12A	P54707	1039 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	LRRC74A	Q0VAA2	488 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	RIN1	Q13671	783 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CYLC2	Q14093	348 aa	Predicted RBP	11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	MMEL1	Q495T6	779 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	SPDYE7P	Q495Y7	208 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	AWAT1	Q58HT5	328 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	C6orf10	Q5SRN2	563 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	C9orf135	Q5VTT2	229 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CDC73	Q6P1J9	531 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CASP12	Q6UXS9	341 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	FUNDC1	Q8IVP5	155 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CLECL1	Q8IZS7	167 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	OR4A15	Q8NGL6	344 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	TSPEAR	Q8WU66	669 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CDS1	Q92903	461 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CMTM5	Q96DZ9	223 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	KATNB1	Q9BVA0	655 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	CCDC106	Q9BWC9	280 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	PIGU	Q9H490	435 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	PARPBP	Q9NWS1	579 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	UPB1	Q9UBR1	384 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	NDUFAF1	Q9Y375	327 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	DTNA	Q9Y4J8	743 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	SPEF1	Q9Y4P9	236 aa		11.44	□□□□□ -0.58
SNHG17-208	ENST00000456953	IGHV1-18	A0A0C4DH31	117 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	RFXANK	O14593	260 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	DNAJA2	O60884	412 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	ANP32D	O95626	131 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	PMS2P2	O95744	297 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	CRYAA	P02489	173 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	HMGN2	P05204	90 aa	Known RBP	11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	UBL4A	P11441	157 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	IFNGR1	P15260	489 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	MPG	P29372	298 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SOAT1	P35610	550 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	FRK	P42685	505 aa	Predicted RBP	11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SLC1A3	P43003	542 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	MERTK	Q12866	999 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	CCNI	Q14094	377 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	TRIP10	Q15642	601 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SLC2A7	Q6PXP3	512 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SHISA2	Q6UWI4	295 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	MSANTD1	Q6ZTZ1	278 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	ZNF614	Q8N883	585 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	RP9	Q8TA86	221 aa	Known RBP	11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	WDR60	Q8WVS4	1066 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	TMEM234	Q8WY98	164 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SLC38A2	Q96QD8	506 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	PANX1	Q96RD7	426 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	ZNF747	Q9BV97	191 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	OBP2B	Q9NPH6	170 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SLC7A10	Q9NS82	523 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	HIF1AN	Q9NWT6	349 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	BTNL2	Q9UIR0	455 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	LEF1	Q9UJU2	399 aa	Predicted RBP	11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	USP22	Q9UPT9	525 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	GRIP1	Q9Y3R0	1128 aa		11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	SPIN1	Q9Y657	262 aa	Predicted RBP	11.43	□□□□□ -0.58
SNHG17-208	ENST00000456953	BBIP1	A8MTZ0	92 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	TFPI	P10646	304 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	COX4I1	P13073	169 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	PAX7	P23759	505 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	MAGEA8	P43361	318 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	SESN3	P58005	492 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	LASP1	Q14847	261 aa	Known RBP	11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	DCST2	Q5T1A1	773 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	TRPM8	Q7Z2W7	1104 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	TREML1	Q86YW5	311 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	SVOPL	Q8N434	492 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	TEX29	Q8N6K0	151 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	FITM2	Q8N6M3	262 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	POU5F2	Q8N7G0	328 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	PCYOX1L	Q8NBM8	494 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	UBASH3B	Q8TF42	649 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	TMEM186	Q96B77	213 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	FAM120B	Q96EK7	910 aa	Known RBP	11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	BOD1	Q96IK1	185 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	CCDC115	Q96NT0	180 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	ACER3	Q9NUN7	267 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	SLC9A8	Q9Y2E8	581 aa		11.42	□□□□□ -0.58
SNHG17-208	ENST00000456953	MRAS	O14807	208 aa		11.41	□□□□□ -0.58
SNHG17-208	ENST00000456953	SCN2B	O60939	215 aa		11.41	□□□□□ -0.58
SNHG17-208	ENST00000456953	EPHA1	P21709	976 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms