RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 OR13C2Q8NGS9 318 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 NEIL2Q969S2 332 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PITX2Q99697 317 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 NICN1Q9BSH3 213 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 GABARAPL1Q9H0R8 117 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 BRF2Q9HAW0 419 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 BAZ2AQ9UIF9 1905 aaKnown RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PAPLNO95428 1278 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ADH1CP00326 375 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 HNF1AP20823 631 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 IMPA1P29218 277 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 HTR1FP30939 366 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ACTR1BP42025 376 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ACTR1AP61163 376 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TESK1Q15569 626 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SLC22A6Q4U2R8 563 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 CTSL3PQ5NE16 218 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 EXOSC6Q5RKV6 272 aaKnown RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 DPY19L4Q7Z388 723 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SLC25A21Q9BQT8 299 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ENKD1Q9H0I2 346 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 BCO1Q9HAY6 547 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 IL26Q9NPH9 171 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 IL36AQ9UHA7 158 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 DPP7Q9UHL4 492 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SLIT2O94813 1529 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TMEM200CA6NKL6 621 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ZNF724A8MTY0 619 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 GPX2P18283 190 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SRMP19623 302 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 CCNOP22674 350 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 EMP2P54851 167 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SGCAQ16586 387 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 C22orf39Q6P5X5 142 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 FAM58AQ8N1B3 248 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 OR4C5Q8NGB2 326 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 HOXB13Q92826 284 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 CDS1Q92903 461 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 GCM1Q9NP62 436 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PLEKHJ1Q9NW61 149 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TMEM150CB9EJG8 249 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 CCL16O15467 120 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 LGI1O95970 557 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SPP1P10451 314 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PCMT1P22061 227 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 LAP3P28838 519 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TRILQ7L0X0 811 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TRAM1L1Q8N609 369 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 MIB2Q96AX9 1013 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 KLRG1Q96E93 195 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 FAM71F1Q96KD3 344 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 SLC25A31Q9H0C2 315 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 ACER3Q9NUN7 267 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 TMEFF2Q9UIK5 374 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 PRSS21Q9Y6M0 314 aa11.49□□□□□ -0.57
NEDD4L-208ENST00000456173 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 MMP11P24347 488 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 CARD17Q5XLA6 110 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 SUSD3Q96L08 255 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 EXOSC3Q9NQT5 275 aaKnown RBP11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 CPNE7Q9UBL6 633 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 SCML1Q9UN30 329 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 MEIKINA0A087WXM9 373 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 TCRBV5S1A1TA0A578 114 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 MT-ND4LP03901 98 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 FOLR1P15328 257 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 DCTDP32321 178 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 MLF1P58340 268 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 OLIG3Q7RTU3 272 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 TMEM217Q8N7C4 229 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 BVESQ8NE79 360 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 OR9A2Q8NGT5 310 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 ACTL8Q9H568 366 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 DMRT3Q9NQL9 472 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 IL17CQ9P0M4 197 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 FAM96BQ9Y3D0 163 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 SGK494L7N484 410 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 EDIL3O43854 480 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 CLRN1P58418 232 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 HNRNPKP61978 463 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■■■□□ 17.2
NEDD4L-208ENST00000456173 TLE4Q04727 773 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 LPCAT3Q6P1A2 487 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 OR9K2Q8NGE7 335 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 BSCL2Q96G97 398 aaPredicted RBP11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 SGCZQ96LD1 299 aa11.48□□□□□ -0.57
NEDD4L-208ENST00000456173 TMEM68Q96MH6 324 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms