RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TSEN54Q7Z6J9 526 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 STK32CQ86UX6 486 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 OFCC1Q8IZS5 231 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 GABRG1Q8N1C3 465 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 SCAIQ8N9R8 606 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 FAM156AQ8NDB6 213 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 TMEM45BQ96B21 275 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 C14orf79Q96F83 325 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 MUC13Q9H3R2 512 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 RIMS3Q9UJD0 308 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 PRPF19Q9UMS4 504 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 SAMD4AQ9UPU9 718 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 RASD1Q9Y272 281 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 B3GALT5Q9Y2C3 310 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 CORINQ9Y5Q5 1042 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 SNX13Q9Y5W8 968 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 POLQO75417 2590 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 GMNNO75496 209 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 UBOX5O94941 541 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 PRSS23O95084 383 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 SEMG1P04279 462 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 PSMB1P20618 241 aaKnown RBP12.73□□□□□ -0.37
COL3A1-203ENST00000450867 NTF4P34130 210 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 UGT2B10P36537 528 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 TAS2R41P59536 307 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 LTBQ06643 244 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 PIN1Q13526 163 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-203ENST00000450867 DEF8Q6ZN54 512 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 Q6ZT83 130 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 ZIC4Q8N9L1 334 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 OR9K2Q8NGE7 335 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 C7orf34Q96L11 122 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 C12orf49Q9H741 205 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 FANCFQ9NPI8 374 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 MRPL39Q9NYK5 338 aaKnown RBP12.73□□□□□ -0.37
COL3A1-203ENST00000450867 ACTR3BQ9P1U1 418 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
COL3A1-203ENST00000450867 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 FAM221AA4D161 298 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 HTR3EA5X5Y0 456 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 M0R082 166 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 FFAR1O14842 300 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 GOSR1O95249 250 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 POU2F1P14859 743 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 TCN1P20061 433 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 EDNRAP25101 427 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 GRPRP30550 384 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 KIR2DL3P43628 341 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 FAM27E3Q08E93 113 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 P2RY6Q15077 328 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 IQCCQ4KMZ1 466 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 TTC33Q6PID6 262 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 NHLRC1Q6VVB1 395 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 H1FNTQ75WM6 255 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 P3H2Q8IVL5 708 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 NKAIN4Q8IVV8 208 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF417Q8TAU3 575 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 HS6ST2Q96MM7 605 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 MOGAT1Q96PD6 335 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF587Q96SQ5 575 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 FKRPQ9H9S5 495 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 MEPEQ9NQ76 525 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 MAN2C1Q9NTJ4 1040 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 PARPBPQ9NWS1 579 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 MALT1Q9UDY8 824 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 NOSIPQ9Y314 301 aaKnown RBP12.72□□□□□ -0.37
COL3A1-203ENST00000450867 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 ENPP4Q9Y6X5 453 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 PDZD2O15018 2839 aa12.72□□□□□ -0.37
COL3A1-203ENST00000450867 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 MT-ND1P03886 318 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 COX5AP20674 150 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
COL3A1-203ENST00000450867 SSTR2P30874 369 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 IFNA8P32881 189 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 TRIM25Q14258 630 aaKnown RBP12.71□□□□□ -0.37
COL3A1-203ENST00000450867 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF74Q16587 644 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 MTX3Q5HYI7 312 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 TMEM225Q6GV28 225 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 LCN8Q6JVE9 175 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 CREB3L2Q70SY1 520 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 FKBP9P1Q75LS8 142 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 FAM86B1Q8N7N1 296 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 LIPHQ8WWY8 451 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-203ENST00000450867 NSMCE2Q96MF7 247 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 DACH2Q96NX9 599 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 OXGR1Q96P68 337 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 KLHL4Q9C0H6 718 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms