RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CDH2P19022 906 aaPredicted RBP13.42□□□□□ -0.26
CHD3-205ENST00000449744 AQP1P29972 269 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 SLC22A25Q6T423 547 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 KLHL24Q6TFL4 600 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 CREB3L2Q70SY1 520 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 ZIC4Q8N9L1 334 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 HIPK4Q8NE63 616 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 BHLHE22Q8NFJ8 381 aaPredicted RBP13.42□□□□□ -0.26
CHD3-205ENST00000449744 RNF217Q8TC41 542 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 DNAJA4Q8WW22 397 aaPredicted RBP13.42□□□□□ -0.26
CHD3-205ENST00000449744 CPPED1Q9BRF8 314 aaPredicted RBP13.42□□□□□ -0.26
CHD3-205ENST00000449744 C1QTNF6Q9BXI9 259 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 AMBRA1Q9C0C7 1298 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 SLC17A5Q9NRA2 495 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
CHD3-205ENST00000449744 A0A0G2JND7 137 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 A0A1B0GWA3 101 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 OVOL3O00110 214 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 OR2T1O43869 369 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 EDF1O60869 148 aaKnown RBP13.41□□□□□ -0.26
CHD3-205ENST00000449744 WNT11O96014 354 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 HEXAP06865 529 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 PNMTP11086 282 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 CD40P25942 277 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 CDKN1AP38936 164 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 P2RY4P51582 365 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 RGS8P57771 180 aaPredicted RBP13.41□□□□□ -0.26
CHD3-205ENST00000449744 PRPS1P60891 318 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 ETFDHQ16134 617 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 PGGHGQ32M88 737 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 RUNDC3AQ59EK9 446 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 AGAP6Q5VW22 663 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 NIPAL3Q6P499 406 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 C5orf46Q6UWT4 87 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 C6orf89Q6UWU4 347 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 DLEU7Q6UYE1 221 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 ARMC8Q8IUR7 673 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 LSMEM1Q8N8F7 131 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 KTI12Q96EK9 354 aaPredicted RBP13.41□□□□□ -0.26
CHD3-205ENST00000449744 IKZF5Q9H5V7 419 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 TESQ9UGI8 421 aaKnown RBP13.41□□□□□ -0.26
CHD3-205ENST00000449744 ABCA2Q9BZC7 2435 aa13.41□□□□□ -0.26
CHD3-205ENST00000449744 USF3Q68DE3 2245 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 OR6C65A6NJZ3 312 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 ZNF587BE7ETH6 402 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 AIM2O14862 343 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 TPST1O60507 370 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 LY6G6DO95868 133 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 ZNF43P17038 809 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 HTR2AP28223 471 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 SELENOPP49908 381 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 EGR4Q05215 589 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 RBBP4Q09028 425 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 NFYCQ13952 458 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 VEZF1Q14119 521 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 CLEC12BQ2HXU8 276 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 C1QTNF12Q5T7M4 302 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 FAM69AQ5T7M9 428 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 ULK3Q6PHR2 472 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.26
CHD3-205ENST00000449744 EPHX4Q8IUS5 362 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 WDR31Q8NA23 367 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 C11orf65Q8NCR3 313 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 TSPEARQ8WU66 669 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 SLC47A1Q96FL8 570 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 CGREF1Q99674 301 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 TRAF4Q9BUZ4 470 aaPredicted RBP13.4□□□□□ -0.26
CHD3-205ENST00000449744 PTDSS2Q9BVG9 487 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
CHD3-205ENST00000449744 FTCDNL1E5RQL4 147 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 MTPNP58546 118 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 SPOCK1Q08629 439 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 C1DQ13901 141 aaKnown RBP13.39□□□□□ -0.27
CHD3-205ENST00000449744 ADRM1Q16186 407 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 METTL21CQ5VZV1 264 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 FAM91A1Q658Y4 838 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 DTX2Q86UW9 622 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 RANBP3LQ86VV4 465 aaPredicted RBP13.39□□□□□ -0.27
CHD3-205ENST00000449744 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 KDM8Q8N371 416 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 DPP10Q8N608 796 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 OXGR1Q96P68 337 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 ALKBH3Q96Q83 286 aaPredicted RBP13.39□□□□□ -0.27
CHD3-205ENST00000449744 EPYCQ99645 322 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 DHRS9Q9BPW9 319 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 PRR14Q9BWN1 585 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
CHD3-205ENST00000449744 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
CHD3-205ENST00000449744 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms