RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CMTM6Q9NX76 183 aa10.54□□□□□ -0.72
LSP1P3-201ENST00000449530 GMPR2Q9P2T1 348 aaKnown RBP10.54□□□□□ -0.72
LSP1P3-201ENST00000449530 SEC14L4Q9UDX3 406 aa10.54□□□□□ -0.72
LSP1P3-201ENST00000449530 RAI1Q7Z5J4 1906 aaPredicted RBP10.54□□□□□ -0.72
LSP1P3-201ENST00000449530 PRR14LQ5THK1 2151 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 NIPBLQ6KC79 2804 aaeCLIP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 TRAV36DV7A0A075B6V5 113 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 A0A087WUJ7 227 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 GMNCA6NCL1 334 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 M0R082 166 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 SNX3O60493 162 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 FMO6PO60774 539 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 CNOT4O95628 575 aaKnown RBP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 RAF1P04049 648 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 TNFRSF1BP20333 461 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 CBLP22681 906 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 DNASE1P24855 282 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 GRPRP30550 384 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 SLC7A2P52569 658 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ART1P52961 327 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 IL1RL1Q01638 556 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 FAPQ12884 760 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 VEZF1Q14119 521 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ENTPD8Q5MY95 495 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 FAM69AQ5T7M9 428 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ZNF613Q6PF04 617 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 AAED1Q7RTV5 226 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 CARM1Q86X55 608 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 MICU2Q8IYU8 434 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ZNF417Q8TAU3 575 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 RASSF5Q8WWW0 418 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 PROX1Q92786 737 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 NINJ1Q92982 152 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 TAAR8Q969N4 342 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 TMEM45BQ96B21 275 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 PLPPR2Q96GM1 343 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 MYLK2Q9H1R3 596 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 CCM2LQ9NUG4 571 aaPredicted RBP10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ASB6Q9NWX5 421 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 UPB1Q9UBR1 384 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 MALT1Q9UDY8 824 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
LSP1P3-201ENST00000449530 ELOVL7A1L3X0 281 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 NME4O00746 187 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 KLF4O43474 513 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 CHP2O43745 196 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 OR2T1O43869 369 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ATE1O95260 518 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ITGA5P08648 1049 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 GGT1P19440 569 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 LIPEQ05469 1076 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 KEAP1Q14145 624 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 CYBRD1Q53TN4 286 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 TSPO2Q5TGU0 170 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 C9orf135Q5VTT2 229 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 WDR88Q6ZMY6 472 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 DEF8Q6ZN54 512 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 TSPYL5Q86VY4 417 aaPredicted RBP10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 KDM8Q8N371 416 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 C10orf53Q8N6V4 93 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ZNF433Q8N7K0 673 aaPredicted RBP10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ZIC4Q8N9L1 334 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ADAMTS16Q8TE57 1224 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 HSD17B8Q92506 261 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 EPYCQ99645 322 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 TMEM43Q9BTV4 400 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 EFCAB1Q9HAE3 211 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 SLC7A10Q9NS82 523 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 PARPBPQ9NWS1 579 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 TAS2R16Q9NYV7 291 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 BAG5Q9UL15 447 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 EDARQ9UNE0 448 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 RASD1Q9Y272 281 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 SH3GLB1Q9Y371 365 aa10.52□□□□□ -0.73
LSP1P3-201ENST00000449530 ABCA2Q9BZC7 2435 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 CIB4A0PJX0 185 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 TRAPPC13A5PLN9 417 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 KPNA4O00629 521 aaPredicted RBP10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 SHOX2O60902 331 aaPredicted RBP10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 FZD7O75084 574 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 VAMP5O95183 116 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 IFNA14P01570 189 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 BGLAPP02818 100 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 THY1P04216 161 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 NQO1P15559 274 aaKnown RBP10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 SELENOPP49908 381 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 NR1H2P55055 460 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 LGALS3BPQ08380 585 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 PPA1Q15181 289 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 TESK1Q15569 626 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 NIPAL3Q6P499 406 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 HACD2Q6Y1H2 254 aa10.51□□□□□ -0.73
LSP1P3-201ENST00000449530 SPNS3Q6ZMD2 512 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms