RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 UMODP07911 640 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ICAM2P13598 275 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 HIST1H1CP16403 213 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 UQCRC1P31930 480 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 LIMK1P53667 647 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 DLX5P56178 289 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SNTA1Q13424 505 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 MFSD13AQ14CX5 517 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PON3Q15166 354 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ALG10Q5BKT4 473 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 FAM69AQ5T7M9 428 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 FAM69BQ5VUD6 431 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 GPR139Q6DWJ6 353 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PAQR6Q6TCH4 344 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OPN5Q6U736 354 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 C6orf15Q6UXA7 325 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 LHFPL3Q86UP9 236 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 GPALPP1Q8IXQ4 340 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SPACA9Q96E40 222 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 KTI12Q96EK9 354 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 DTNBP1Q96EV8 351 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 EAF1Q96JC9 268 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 COQ7Q99807 217 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 EDEM2Q9BV94 578 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 KATNB1Q9BVA0 655 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ASPNQ9BXN1 380 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 MMP27Q9H306 513 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 AKIRIN1Q9H9L7 192 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PALMDQ9NP74 551 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PPP4R1LQ9P1A2 415 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 IGLV3-32A0A0A0MS00 114 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 NSG1A0A0A6YYJ2 146 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 CCDC182A6NF36 153 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 C12orf71A8MTZ7 269 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 FAM47E-STBD1D6RA91 191 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 LRRN3E7EW58 273 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SLC30A4O14863 429 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SUSD5O60279 629 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 CBFA2T3O75081 653 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 OR2J2O76002 312 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 AHSA1O95433 338 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 TXNDC12O95881 172 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 BGLAPP02818 100 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SBK2P0C263 348 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 COX6A1P12074 109 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SDHAP31040 664 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GABRA5P31644 462 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SOX3P41225 446 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 RPS5P46782 204 aaKnown RBP9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 ZNF41P51814 821 aaPredicted RBP9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 TAS2R43P59537 309 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 CTXN1P60606 82 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 INSM1Q01101 510 aaPredicted RBP9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GPR50Q13585 617 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GALEQ14376 348 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GGTLC2Q14390 218 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 ZNF404Q494X3 552 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 OR2G6Q5TZ20 316 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 LIPKQ5VXJ0 399 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 CDCP2Q5VXM1 449 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 TMEM81Q6P7N7 255 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 NDUFAF7Q7L592 441 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SHFQ7M4L6 423 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SIRT6Q8N6T7 355 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 SDR9C7Q8NEX9 313 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 OR4K13Q8NH42 304 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 MCFD2Q8NI22 146 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GATAD2BQ8WXI9 593 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 KISS1RQ969F8 398 aaPredicted RBP9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 IMMP1LQ96LU5 166 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 MOGAT1Q96PD6 335 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 RASL10BQ96S79 203 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 LRFN3Q9BTN0 628 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 MED20Q9H944 212 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 CPNE5Q9HCH3 593 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GRHPRQ9UBQ7 328 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 MOKQ9UQ07 419 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 GSTK1Q9Y2Q3 226 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 YARS2Q9Y2Z4 477 aaKnown RBP9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 NOX1Q9Y5S8 564 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 HS3ST3B1Q9Y662 390 aa9.59□□□□□ -0.87
VIPAS39-203ENST00000448935 MPDZO75970 2070 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 LAMA1P25391 3075 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 CCDC187A0A096LP49 1063 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 CLDN25C9JDP6 229 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF208O43345 1280 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 GMFGO60234 142 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 NPIPB7O75200 414 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 TRIM3O75382 744 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 OR6A2O95222 327 aa9.58□□□□□ -0.88
VIPAS39-203ENST00000448935 INHBBP09529 407 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms