RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 H7C1C5 153 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 GABRPO00591 440 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 NTN3O00634 580 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 TBX1O43435 398 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SUSD5O60279 629 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 LDOC1O95751 146 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 HLA-DPB1P04440 258 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 ASAH2BP0C7U1 165 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 S100A1P23297 94 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 AHCYP23526 432 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 GTF2E2P29084 291 aaKnown RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 CDKN2AP42771 156 aaKnown RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 LCN6P62502 163 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF85Q03923 595 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 RPL18Q07020 188 aaKnown RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC3A1Q07837 685 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 LGALS3BPQ08380 585 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 DNASE1L3Q13609 305 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 CLPPQ16740 277 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 BICRALQ6AI39 1079 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 ARL9Q6T311 187 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 RPTNQ6XPR3 784 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SSX6Q7RTT6 188 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC7A5P1Q8MH63 180 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 RFLNBQ8N5W9 214 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 NLGN4YQ8NFZ3 816 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR5L2Q8NGL0 311 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC25A46Q96AG3 418 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 TSSK2Q96PF2 358 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 ULBP3Q9BZM4 244 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SMURF1Q9HCE7 757 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 TRIM36Q9NQ86 728 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 RXFP3Q9NSD7 469 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 HAO2Q9NYQ3 351 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 C19orf25Q9UFG5 118 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 TMED7Q9Y3B3 224 aa8.65□□□□□ -1.02
COL6A4P1-201ENST00000446690 TRDV1A0A1B0GX56 115 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC35F4A4IF30 521 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM200CA6NKL6 621 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ARPC3O15145 178 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 RNF13O43567 381 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 SELENOFO60613 162 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2J2O76002 312 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 IL1AP01583 271 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 CD14P08571 375 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 SP9P0CG40 484 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 SPI1P17947 270 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 CD40LGP29965 261 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 GRPRP30550 384 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 PYCR1P32322 319 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 TNFSF8P32971 234 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACVR1BP36896 505 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 MPLP40238 635 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 POLR2HP52434 150 aaKnown RBP8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC26A5P58743 744 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF45Q02386 682 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACSM1Q08AH1 577 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 POU4F2Q12837 409 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 EFR3AQ14156 821 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 BTBD16Q32M84 506 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 TP53I3Q53FA7 332 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 BPHLQ86WA6 291 aaPredicted RBP8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 LSM14AQ8ND56 463 aaKnown RBP8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 NUBPLQ8TB37 319 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPR119Q8TDV5 335 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 CNN2Q99439 309 aaKnown RBP8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 MROQ9BYG7 248 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 INPP5EQ9NRR6 644 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 TAS2R10Q9NYW0 307 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 KLRF1Q9NZS2 232 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 MED11Q9P086 117 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF346Q9UL40 294 aaKnown RBP8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 HEATR5AQ86XA9 2040 aa8.65□□□□□ -1.03
COL6A4P1-201ENST00000446690 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TRAV36DV7A0A075B6V5 113 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM72A0PK05 275 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TAF4O00268 1085 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 DVL2O14641 736 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TPD52L2O43399 206 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 IDH3BO43837 385 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 NCR1O76036 304 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZFAND5O76080 213 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TCEA1P23193 301 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 DIO1P49895 249 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACTC1P68032 377 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACTA1P68133 377 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 E2F1Q01094 437 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZFP36L1Q07352 338 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 KCNJ8Q15842 424 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LCN1P1Q5VSP4 162 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 VASNQ6EMK4 673 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ADGRG3Q86Y34 549 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LAX1Q8IWV1 398 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 CADM3Q8N126 398 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms