RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RAMP1O60894 148 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SPAG6O75602 509 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZNF189O75820 626 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 IFNB1P01574 187 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 JCHAINP01591 159 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 APOC2P02655 101 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SDC1P18827 310 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 KDELR1P24390 212 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 IVDP26440 423 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 MAPK3P27361 379 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PCK1P35558 622 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 CDKN2BP42772 138 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 XCR1P46094 333 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 IFNAR2P48551 515 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 CAMLGP49069 296 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 OSTNP61366 133 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 IGLV3-21P80748 117 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 OTUD4Q01804 1114 aaKnown RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC25A11Q02978 314 aaKnown RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ASAH1Q13510 395 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 TFDP2Q14188 446 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 UBE2V2Q15819 145 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PTPN20Q4JDL3 420 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 TMEM52BQ4KMG9 183 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC22A10Q63ZE4 541 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 C6orf89Q6UWU4 347 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 STAC2Q6ZMT1 411 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 USP50Q70EL3 339 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ARMCX2Q7L311 632 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SYVN1Q86TM6 617 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PARGQ86W56 976 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 LRRC34Q8IZ02 419 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PDIK1LQ8N165 341 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZNF525Q8N782 197 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 BCORP1Q8N888 145 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PPTC7Q8NI37 304 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 HAUS1Q96CS2 278 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 HPDLQ96IR7 371 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 C9orf72Q96LT7 481 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 MAGEB18Q96M61 343 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 OR5M11Q96RB7 305 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 TGS1Q96RS0 853 aaKnown RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 VPS37BQ9H9H4 285 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 GPN2Q9H9Y4 310 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 NGBQ9NPG2 151 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 MIEF1Q9NQG6 463 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 YAE1D1Q9NRH1 226 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ELOVL2Q9NXB9 296 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 FOXJ3Q9UPW0 622 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 IKBKGQ9Y6K9 419 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ANK1P16157 1881 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 RALGAPA2Q2PPJ7 1873 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 PLXNB2O15031 1838 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 SBF1O95248 1867 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 PLXNA1Q9UIW2 1896 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 IQANK1A0A1B0GTG1 560 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 A0A1B0GUA9 196 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 WASHC1A8K0Z3 465 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 TCP11X1B4DZS4 312 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 WASH3PC4AMC7 463 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 F8VP50 259 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 B4GALT5O43286 388 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CST8O60676 142 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 IGFBP1P08833 259 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ANXA4P09525 319 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 P0C879 139 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF286BP0CG31 522 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 IGHV1-2P23083 117 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 MIPP30301 263 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 SDC4P31431 198 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 EPHX2P34913 555 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ACVR1BP36896 505 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ASMTP46597 345 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 MNAT1P51948 309 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLC18A1P54219 525 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CDH6P55285 790 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 EIF3EP60228 445 aaKnown RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 DYNLT1P63172 113 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 BASP1P80723 227 aaKnown RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 NDPQ00604 133 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 OGDHQ02218 1023 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 PUDPQ08623 228 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 PDIA2Q13087 525 aaKnown RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 DPYSL3Q14195 570 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 PDK2Q15119 407 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 SNCBQ16143 134 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 GOLGA7BQ2TAP0 167 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CYBRD1Q53TN4 286 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 HHATQ5VTY9 493 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 C4orf22Q6V702 233 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 WASH2PQ6VEQ5 465 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CATSPER4Q7RTX7 472 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 TRPM8Q7Z2W7 1104 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CDR2LQ86X02 465 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 CDKL3Q8IVW4 592 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 GPR65Q8IYL9 337 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 LRRC52Q8N7C0 313 aa3.27□□□□□ -1.89
HMGB3P6-201ENST00000444896 ACTL9Q8TC94 416 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms