RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HOXB13Q92826 284 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 HCAR1Q9BXC0 346 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 CACNA1IQ9P0X4 2223 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 NKX2-2O95096 273 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 MADCAM1Q13477 382 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 XKRXQ6PP77 449 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF367Q7RTV3 350 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 OR4N2Q8NGD1 307 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 A0A1W2PQM1 296 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM183AA6NL82 134 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF432O94892 652 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 TFPTP0C1Z6 253 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 BMP4P12644 408 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 SUMO3P55854 103 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 TRAM1Q15629 374 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC29A1Q99808 456 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 EGLN3Q9H6Z9 239 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 WDR54Q9H977 334 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 NDUFAF4Q9P032 175 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 KLHL13Q9P2N7 655 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PCDHGA6Q9Y5G7 932 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ST14Q9Y5Y6 855 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 CXCL13O43927 109 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 CD14P08571 375 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 RBM45Q8IUH3 476 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 BOLLQ8N9W6 283 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PRMT8Q9NR22 394 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ERVK-18Q9QC07 812 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PMF1-BGLAPU3KQ54 211 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 A0A1W2PNR3 127 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 OR7A10O76100 309 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 MT-ND2P03891 347 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 LCKP06239 509 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PTGS2P35354 604 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 RBM34P42696 430 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 OR11G2Q8NGC1 345 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 TMEM41AQ96HV5 264 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 OLAHQ9NV23 265 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 CD300AQ9UGN4 299 aa12.92□□□□□ -0.34
SMARCA4-204ENST00000444061 PLSCR5A0PG75 271 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 CCRL2O00421 344 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 SNAPC5O75971 98 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 GASTP01350 101 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 LIPCP11150 499 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 POU3F4P49335 361 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ECH1Q13011 328 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF628Q5EBL2 1059 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF813Q6ZN06 617 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 TMEM138Q9NPI0 162 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 MN1Q10571 1320 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR3A3P47888 321 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR3A2P47893 321 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 TSC22D1Q15714 1073 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM219BQ5XKK7 198 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 PM20D2Q8IYS1 436 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR10G3Q8NGC4 313 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR5L1Q8NGL2 311 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 M1APQ8TC57 530 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 GATAD2BQ8WXI9 593 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 RNF6Q9Y252 685 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 M0R082 166 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 RBMXL2O75526 392 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ITGB2P05107 769 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ANKRD34CP0C6C1 535 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 CEACAM1P13688 526 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 AKR1D1P51857 326 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 KEAP1Q14145 624 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 RSPO4Q2I0M5 234 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR13C3Q8NGS6 347 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF417Q8TAU3 575 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF587Q96SQ5 575 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 MGLLQ99685 303 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 DYNLRB1Q9NP97 96 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR6C70A6NIJ9 312 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 CSF2RBP32927 897 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms