RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 GMPPAQ96IJ6 420 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 JSRP1Q96MG2 331 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 CSPG4P5Q96PW8 444 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 RAB1BQ9H0U4 201 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 RBKSQ9H477 322 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 PARVGQ9HBI0 331 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 FGF20Q9NP95 211 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF302Q9NR11 478 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 DYRK4Q9NR20 520 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SPHK2Q9NRA0 654 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ABCC13Q9NSE7 274 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 NDE1Q9NXR1 346 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 CHMP5Q9NZZ3 219 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 TMCO1Q9UM00 188 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 COPS3Q9UNS2 423 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC17A4Q9Y2C5 497 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 RBMX2Q9Y388 322 aaKnown RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 GREB1LQ9C091 1923 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SH3TC1Q8TE82 1336 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 MYMKA6NI61 221 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 PMS2P5A8MQ11 134 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 FOXI3A8MTJ6 420 aaPredicted RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 PDZK1P1A8MUH7 402 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 M0R3G1 203 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SULT2B1O00204 365 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 GOSR2O14653 212 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 AIM2O14862 343 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 BUB3O43684 328 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 CBR3O75828 277 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SEMA4FO95754 770 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 HLA-HP01893 362 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 ALPLP05186 524 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 FGF1P05230 155 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 PATE4P0C8F1 98 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 HSD17B1P14061 328 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 ABOP16442 354 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 UGT1A4P22310 534 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SPAM1P38567 509 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 GSCP56915 257 aaPredicted RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 FBXW4P57775 412 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 GPX6P59796 221 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 NANOS2P60321 138 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 LCN2P80188 198 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 PUDPQ08623 228 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 KCNJ11Q14654 390 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 IZUMO4Q1ZYL8 232 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 C18orf21Q32NC0 220 aaPredicted RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SOHLH1Q5JUK2 328 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 CCDC137Q6PK04 289 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 MBOAT1Q6ZNC8 495 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 GDPGP1Q6ZNW5 385 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 FRA10AC1Q70Z53 315 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 ERICH1Q86X53 443 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF100Q8IYN0 542 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC39A11Q8N1S5 342 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 JAGN1Q8N5M9 183 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 OR56B4Q8NH76 319 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 GTF3AQ92664 365 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 CCDC126Q96EE4 140 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 ECSITQ9BQ95 431 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 TMEM246Q9BRR3 403 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 UCK2Q9BZX2 261 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 MFFQ9GZY8 342 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 AMBNQ9NP70 447 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 THUMPD1Q9NXG2 353 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 CD300AQ9UGN4 299 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC2A6Q9UGQ3 507 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 LSM7Q9UK45 103 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 STAP1Q9ULZ2 295 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 MGAT4AQ9UM21 535 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 RPL36Q9Y3U8 105 aaKnown RBP4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 KPTNQ9Y664 436 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
TM9SF3-202ENST00000443638 TRAV6A0A075B6T7 132 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 A0A1W2PRD5 423 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 TMEM120BA0PK00 339 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 ERICH2A1L162 156 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 TRABD2BA6NFA1 517 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC17A2O00624 439 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 NTN3O00634 580 aaPredicted RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 GMDSO60547 372 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 EIF4E2O60573 245 aaKnown RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 TOM1O60784 492 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CT45A10P0DMU9 189 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 HPGDP15428 266 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CCNOP22674 350 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 TFPI2P48307 235 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 PRELPP51888 382 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CRISP1P54107 249 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 LMO4P61968 165 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 PSMC5P62195 406 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 NCF4Q15080 339 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SIX1Q15475 284 aaPredicted RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 VAMP3Q15836 100 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 USF2Q15853 346 aaPredicted RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC22A6Q4U2R8 563 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 MEDAGQ5VYS4 303 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 AWAT2Q6E213 333 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 NDUFAF7Q7L592 441 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms