RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NIPAL2Q9H841 368 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 RNF122Q9H9V4 155 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 PLGRKTQ9HBL7 147 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 GP6Q9HCN6 339 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 TRIM36Q9NQ86 728 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 RASSF1Q9NS23 344 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 OCIAD1Q9NX40 245 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 ERVK13-1Q9NX77 482 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 PAQR5Q9NXK6 330 aaPredicted RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 BABAM2Q9NXR7 383 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 ALKBH4Q9NXW9 302 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 TAS2R10Q9NYW0 307 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 TVP23BQ9NYZ1 205 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 VSX1Q9NZR4 365 aaPredicted RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 KLHL9Q9P2J3 617 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 ERVK-18Q9QC07 812 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 RHCGQ9UBD6 479 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 CRNNQ9UBG3 495 aaPredicted RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 TNFRSF10DQ9UBN6 386 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 CTSFQ9UBX1 484 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 KLHL3Q9UH77 587 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 IL20RAQ9UHF4 553 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 OSGIN1Q9UJX0 560 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 TCFL5Q9UL49 500 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 ATXN7L1Q9ULK2 861 aaPredicted RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 FARSAQ9Y285 508 aaKnown RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 DTX4Q9Y2E6 619 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 WIF1Q9Y5W5 379 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 PEX16Q9Y5Y5 336 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 HS3ST3B1Q9Y662 390 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 MAU2Q9Y6X3 613 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 MUC3AQ02505 3323 aa2.57□□□□□ -2
LINC00393-201ENST00000443621 ASCC3Q8N3C0 2202 aaKnown RBP2.57□□□□□ -2
LINC00393-201ENST00000443621 HEATR5AQ86XA9 2040 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 KNL1Q8NG31 2342 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 NCOR1O75376 2440 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 IGKV1D-42A0A075B6H8 117 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TMED7-TICAM2A0A0A6YYA0 188 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TRBV11-1A0A0K0K1C0 115 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CENPVL1A0A0U1RR11 272 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 A0A1W2PRG6 482 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 A8MU76 341 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CDRT15L2A8MXV6 281 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PATE3B3GLJ2 98 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CLDN25C9JDP6 229 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TNFRSF10AO00220 468 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PLPP3O14495 311 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 XKRYO14609 159 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TM4SF5O14894 197 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 SNPHO15079 494 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TLX3O43711 291 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 SUSD5O60279 629 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TMCC2O75069 709 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ADAM11O75078 769 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ICOSLGO75144 302 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CSO75390 466 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 ITGA10O75578 1167 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 GPX5O75715 221 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CDC123O75794 336 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 ARL6IP5O75915 188 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 STK17BO94768 372 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 OR6A2O95222 327 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ATE1O95260 518 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TIAF1O95411 115 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 MT-CO3P00414 261 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 RENP00797 406 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PTHP01270 115 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 APOC1P02654 83 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 BGLAPP02818 100 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 MT-ND5P03915 603 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ISG15P05161 165 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 UMODP07911 640 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 GKN3PP0CG01 181 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CD37P11049 281 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ZNF182P17025 639 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 TGM1P22735 817 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CTSSP25774 331 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 MST1P26927 711 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 MAPK3P27361 379 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 PSMB9P28065 219 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TACR3P29371 465 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 SRD5A2P31213 254 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 S100A5P33763 92 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ATP6V1E1P36543 226 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PTGDSP41222 190 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CRYBB2P43320 205 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 MTNR1BP49286 362 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 RORCP51449 518 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ZNF41P51814 821 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 AGFG1P52594 562 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 EFNA3P52797 238 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PPP5CP53041 499 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 NUDT6P53370 316 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 SUCLG1P53597 346 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 MLF1P58340 268 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 RPL27P61353 136 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 LSM6P62312 80 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 RAC1P63000 192 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CSNK2A1P68400 391 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 SIRPAP78324 504 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms