RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CRMP1Q14194 572 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 KCNAB1Q14722 419 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 NNATQ16517 81 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF791Q3KP31 576 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 OR2G6Q5TZ20 316 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 NKAIN2Q5VXU1 208 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PAMR1Q6UXH9 720 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 THSD4Q6ZMP0 1018 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 KANSL1Q7Z3B3 1105 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 BPHLQ86WA6 291 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 CACTIN-AS1Q8N1I8 211 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SYS1Q8N2H4 156 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PARP16Q8N5Y8 322 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SLC37A3Q8NCC5 494 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PLPP5Q8NEB5 264 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 BBS1Q8NFJ9 593 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 OR4F15Q8NGB8 312 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 OR4D9Q8NGE8 314 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 OR1N1Q8NGS0 311 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 DOK4Q8TEW6 326 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF721Q8TF20 911 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ACOT12Q8WYK0 555 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 TSLPQ969D9 159 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ADIPOR1Q96A54 375 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 EFHD2Q96C19 240 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ITPKCQ96DU7 683 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 GAL3ST4Q96RP7 486 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 YIPF2Q9BWQ6 316 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 OR8D2Q9GZM6 311 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 WWTR1Q9GZV5 400 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 NXF5Q9H1B4 397 aaKnown RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 FKRPQ9H9S5 495 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF229Q9UJW7 825 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 CARD8Q9Y2G2 431 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PCDHGA1Q9Y5H4 931 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 MAU2Q9Y6X3 613 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ADGRG4Q8IZF6 3080 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 FUOMA2VDF0 154 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ANKRD61A6NGH8 418 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 HSPB2A8KAH6 182 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 GTPBP1O00178 669 aaKnown RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 TMEM127O75204 238 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 CDRT1O95170 752 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SLC2A10O95528 541 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 NTN1O95631 604 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 MT-ATP6P00846 226 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SERPINA3P01011 423 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 CD1AP06126 327 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SBK2P0C263 348 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 PGCP20142 388 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ALAS2P22557 587 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 OR1D4P47884 311 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 MTNR1BP49286 362 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 CCR4P51679 360 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SLC25A1P53007 311 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 FOXK1P85037 733 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 HNRNPA0Q13151 305 aaKnown RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 DOC2BQ14184 412 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ERV3-1Q14264 604 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 HSPB2Q16082 182 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.083e-6■□□□□ 10.8
HDAC6-209ENST00000440653 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 KLHL12Q53G59 568 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 AGAP7PQ5VUJ5 663 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 GPR139Q6DWJ6 353 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 C22orf42Q6IC83 251 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 METAP1DQ6UB28 335 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 NANOGNBQ7Z5D8 188 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 LYSMD2Q8IV50 215 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 C9orf40Q8IXQ3 194 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SLC25A45Q8N413 288 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ARIH2OSQ8N7S6 290 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF441Q8N8Z8 693 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ZSCAN1Q8NBB4 408 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 FAM98AQ8NCA5 519 aaKnown RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 OR10H4Q8NGA5 316 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 NEIL3Q8TAT5 605 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 PHOSPHO1Q8TCT1 267 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SPRYD4Q8WW59 207 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 GATAD2BQ8WXI9 593 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 TP53INP1Q96A56 240 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 OTULINQ96BN8 352 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 C1GALT1C1Q96EU7 318 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ERMAPQ96PL5 475 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SNX18Q96RF0 628 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 MNTQ99583 582 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 SLC7A5P2Q9GIP4 190 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 VN1R1Q9GZP7 353 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms