RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 C17orf78Q8N4C9 275 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 C11orf65Q8NCR3 313 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 C1orf162Q8NEQ5 155 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 LILRB1Q8NHL6 650 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 MFSD8Q8NHS3 518 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 DNAJA4Q8WW22 397 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC38A4Q969I6 547 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 COX4I2Q96KJ9 171 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 ZNF385AQ96PM9 386 aaKnown RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 CPPED1Q9BRF8 314 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 C1QTNF6Q9BXI9 259 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 PIF1Q9H611 641 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 ZNF701Q9NV72 531 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 AMDHD2Q9Y303 409 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC25A15Q9Y619 301 aa17.46■□□□□ 0.39
SHROOM1-204ENST00000440118 NAV3Q8IVL0 2385 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 TLN2Q9Y4G6 2542 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 TRBV5-3A0A0A0MS03 114 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 A0A1B0GWA3 101 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 ZNF587BE7ETH6 402 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 PNMTP11086 282 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 PAX1P15863 534 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 GPX2P18283 190 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 MPGP29372 298 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 CDKN1AP38936 164 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 FOXG1P55316 489 aaPredicted RBP17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 MTPNP58546 118 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 VEZF1Q14119 521 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 NIPAL3Q6P499 406 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 C5orf46Q6UWT4 87 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 ALKBH3Q96Q83 286 aaPredicted RBP17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 C12orf10Q9HB07 376 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 TMEM27Q9HBJ8 222 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC52A3Q9NQ40 469 aa17.45■□□□□ 0.38
SHROOM1-204ENST00000440118 NSD1Q96L73 2696 aaPredicted RBP17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 OR2T1O43869 369 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 WNT11O96014 354 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 TROVE2P10155 538 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 CD40P25942 277 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 HTR2AP28223 471 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 C1DQ13901 141 aaKnown RBP17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 ULK3Q6PHR2 472 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 IGFBPL1Q8WX77 278 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 KTI12Q96EK9 354 aaPredicted RBP17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 HS6ST2Q96MM7 605 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 MUS81Q96NY9 551 aa17.44■□□□□ 0.38
SHROOM1-204ENST00000440118 OR6C65A6NJZ3 312 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SHISA9B4DS77 424 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 AIM2O14862 343 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 AKAP8O43823 692 aaKnown RBP17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 TPST1O60507 370 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 NPIPB7O75200 414 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 DANCRP0C864 163 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 NQO1P15559 274 aaKnown RBP17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 ZNF43P17038 809 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SELENOPP49908 381 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 PRPS1P60891 318 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 LTBQ06643 244 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SPOCK1Q08629 439 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 RUNDC3AQ59EK9 446 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 FAM69AQ5T7M9 428 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 AGAP6Q5VW22 663 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 C6orf89Q6UWU4 347 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 DLEU7Q6UYE1 221 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 CREB3L2Q70SY1 520 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 CIARTQ8N365 385 aaPredicted RBP17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 LSMEM1Q8N8F7 131 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SMYD1Q8NB12 490 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC47A1Q96FL8 570 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 ANKRD27Q96NW4 1050 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 EPYCQ99645 322 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 CGREF1Q99674 301 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 TMEM120AQ9BXJ8 343 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC17A5Q9NRA2 495 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 GMEB1Q9Y692 573 aa17.43■□□□□ 0.38
SHROOM1-204ENST00000440118 TRAV36DV7A0A075B6V5 113 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 PDLIM1O00151 329 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 SASH3O75995 380 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 HEXAP06865 529 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 CLDN17P56750 224 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 UBE2NP61088 152 aaKnown RBP17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 ETFDHQ16134 617 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 PGGHGQ32M88 737 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 FAM91A1Q658Y4 838 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 HMBOX1Q6NT76 420 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 COMTD1Q86VU5 262 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 KDM8Q8N371 416 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 DPP10Q8N608 796 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 C10orf53Q8N6V4 93 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 ZIC4Q8N9L1 334 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC26A7Q8TE54 656 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 POM121Q96HA1 1249 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 KCNS3Q9BQ31 491 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 PTDSS2Q9BVG9 487 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 PRR14Q9BWN1 585 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 AMBRA1Q9C0C7 1298 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 ZNF385DQ9H6B1 395 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 EVA1AQ9H8M9 152 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 FKRPQ9H9S5 495 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms