RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 SLC25A36Q96CQ1 311 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 ZNF385AQ96PM9 386 aaKnown RBP16.51■□□□□ 0.23
CCDC78-204ENST00000439619 KCNS3Q9BQ31 491 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 C1QTNF6Q9BXI9 259 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 MOV10Q9HCE1 1003 aaKnown RBP16.51■□□□□ 0.23
CCDC78-204ENST00000439619 CBLN4Q9NTU7 201 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 SLC25A37Q9NYZ2 338 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 DSCAMO60469 2012 aa16.51■□□□□ 0.23
CCDC78-204ENST00000439619 ZNF469Q96JG9 3925 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-204ENST00000439619 TMEM229AB2RXF0 380 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 NPIPB7O75200 414 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ARAFP10398 606 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ZNF43P17038 809 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 UBE2NP61088 152 aaKnown RBP16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ZNF544Q6NX49 715 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 CREB3L2Q70SY1 520 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 NET1Q7Z628 596 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-204ENST00000439619 FUNDC1Q8IVP5 155 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 MUC15Q8N387 334 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ZIC4Q8N9L1 334 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 SLC38A4Q969I6 547 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ZNF317Q96PQ6 595 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-204ENST00000439619 TMEM38AQ9H6F2 299 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 EVA1AQ9H8M9 152 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 CHST2Q9Y4C5 530 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 GMEB1Q9Y692 573 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 ATP23Q9Y6H3 246 aa16.5■□□□□ 0.23
CCDC78-204ENST00000439619 RNF223E7ERA6 249 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 AKAP8O43823 692 aaKnown RBP16.49■□□□□ 0.23
CCDC78-204ENST00000439619 HOXB9P17482 250 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-204ENST00000439619 PCSK6P29122 969 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 ACVR1BP36896 505 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 RPS5P46782 204 aaKnown RBP16.49■□□□□ 0.23
CCDC78-204ENST00000439619 FOXG1P55316 489 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-204ENST00000439619 HOXC5Q00444 222 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 CHRNB3Q05901 458 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 C1DQ13901 141 aaKnown RBP16.49■□□□□ 0.23
CCDC78-204ENST00000439619 SCARB2Q14108 478 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 ALG10BQ5I7T1 473 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 HMBOX1Q6NT76 420 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 NIPAL3Q6P499 406 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 ULK3Q6PHR2 472 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 DHRS4L2Q6PKH6 230 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 LSMEM1Q8N8F7 131 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 WDR31Q8NA23 367 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 RNF217Q8TC41 542 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 EPYCQ99645 322 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 RHNO1Q9BSD3 238 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 REG4Q9BYZ8 158 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 TMEM27Q9HBJ8 222 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 VAPAQ9P0L0 249 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 ANGPT4Q9Y264 503 aa16.49■□□□□ 0.23
CCDC78-204ENST00000439619 ARID1AO14497 2285 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 VPS13CQ709C8 3753 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 E7EQL1 145 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 AIM2O14862 343 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 ANGPT2O15123 496 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 CD8AP01732 235 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 IGHV4-39P01824 125 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 NUDT6P53370 316 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 SH3BGRP55822 239 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-204ENST00000439619 DSCR9P59020 149 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 IL1RL1Q01638 556 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 MFSD13AQ14CX5 517 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 RAB35Q15286 201 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 TTMPQ5BVD1 217 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 PAGE3Q5JUK9 113 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 FAM69AQ5T7M9 428 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 FAM91A1Q658Y4 838 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 C6orf89Q6UWU4 347 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 RANBP3LQ86VV4 465 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-204ENST00000439619 HIPK4Q8NE63 616 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 STON2Q8WXE9 905 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 SLC47A1Q96FL8 570 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 MAGEB18Q96M61 343 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 SIKE1Q9BRV8 207 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 CACNG6Q9BXT2 260 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 SLAMF8Q9P0V8 285 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 TESQ9UGI8 421 aaKnown RBP16.48■□□□□ 0.23
CCDC78-204ENST00000439619 LEF1Q9UJU2 399 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-204ENST00000439619 RCE1Q9Y256 329 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 B3GALT5Q9Y2C3 310 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 NDUFAF1Q9Y375 327 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 PMF1-BGLAPU3KQ54 211 aa16.48■□□□□ 0.23
CCDC78-204ENST00000439619 TRAV36DV7A0A075B6V5 113 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 A0A1B0GWA3 101 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 SSX4O60224 188 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 SLC43A1O75387 559 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 VIMP08670 466 aaKnown RBP16.47■□□□□ 0.23
CCDC78-204ENST00000439619 GPX2P18283 190 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 SELENOPP49908 381 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 RGS8P57771 180 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-204ENST00000439619 DMTNQ08495 405 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 SPOCK1Q08629 439 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 HIKESHIQ53FT3 197 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 ARMC8Q8IUR7 673 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 MSRB3Q8IXL7 192 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 ANKK1Q8NFD2 765 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 KTI12Q96EK9 354 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms