RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PLD1Q13393 1074 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ASAH1Q13510 395 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ISXQ2M1V0 245 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 QRICH1Q2TAL8 776 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 LGSNQ5TDP6 509 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF57Q68EA5 555 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 LEG1Q6P5S2 330 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 WASH2PQ6VEQ5 465 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 VPS36Q86VN1 386 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 NFAM1Q8NET5 270 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF461Q8TAF7 563 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 MRAPQ8TCY5 172 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TFB1MQ8WVM0 346 aaKnown RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ADIPOR1Q96A54 375 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 DHTKD1Q96HY7 919 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 HPDLQ96IR7 371 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 VSTM2LQ96N03 204 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TBCDQ9BTW9 1192 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TSSK1BQ9BXA7 367 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 NFKBIZQ9BYH8 718 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ELOVL4Q9GZR5 314 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLITRK2Q9H156 845 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 IKZF5Q9H5V7 419 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 SYNDIG1Q9H7V2 258 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 GPN2Q9H9Y4 310 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ATXN10Q9UBB4 475 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 Q9UF83 564 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 VWA8A3KMH1 1905 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDCD11Q14690 1871 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 MTCL1Q9Y4B5 1905 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 RGSL1A5PLK6 1076 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZSCAN5BA6NJL1 495 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 LRRC30A6NM36 301 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 WASHC1A8K0Z3 465 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 MKRN2OSH3BPM6 223 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TRAPPC3O43617 180 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 LANCL1O43813 399 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 NMT2O60551 498 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 DIRAS3O95661 229 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 GIG44P09565 113 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDHBP11177 359 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TOP1P11387 765 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ANXA3P12429 323 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 UQCRBP14927 111 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CD86P42081 329 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 XCR1P46094 333 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 OSTNP61366 133 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 KDSRQ06136 332 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CD47Q08722 323 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CHI3L2Q15782 390 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 INAQ16352 499 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CAMK4Q16566 473 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TMEM52BQ4KMG9 183 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 PAN3Q58A45 887 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 SCYL2Q6P3W7 929 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 C2orf66Q6UXQ4 117 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CYS1Q717R9 158 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 STKLD1Q8NE28 680 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CNIH3Q8TBE1 160 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCDC110Q8TBZ0 833 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 C18orf25Q96B23 403 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 UPRTQ96BW1 309 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CYYR1Q96J86 154 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 SIGLEC12Q96PQ1 595 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 SMR3AQ99954 134 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 GSDMCQ9BYG8 508 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 DEFB126Q9BYW3 111 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCSER1Q9C0I3 900 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 DPH5Q9H2P9 285 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TM9SF3Q9HD45 589 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 EXOSC3Q9NQT5 275 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF302Q9NR11 478 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TNFRSF19Q9NS68 423 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF275Q9NSD4 429 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 RBM28Q9NW13 759 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 SENP1Q9P0U3 644 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 AURKCQ9UQB9 309 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZFC3H1O60293 1989 aaKnown RBP2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 KNTC1P50748 2209 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 RTTNQ86VV8 2226 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 NOTCH1P46531 2555 aa2.41□□□□□ -2.02
HMGB3P12-201ENST00000438745 TNRC6BQ9UPQ9 1833 aaKnown RBP2.4□□□□□ -2.02
HMGB3P12-201ENST00000438745 RP1L1Q8IWN7 2480 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGHV3-35A0A0C4DH35 117 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 FAM168BA1KXE4 195 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 SAGE2PA6NJ88 616 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 SLC17A2O00624 439 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 SDHDO14521 159 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR4F21O95013 312 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 IFNB1P01574 187 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 CCDC166P0CW27 439 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 NCF1P14598 390 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 XRCC1P18887 633 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGFBP5P24593 272 aa2.4□□□□□ -2.03
HMGB3P12-201ENST00000438745 CDH5P33151 784 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms