RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TMEM59Q9BXS4 323 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 TXLNGYQ9BZA5 131 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RAB18Q9NP72 206 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 TEX50A0A1B0GTY4 177 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SIX6O95475 246 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR4Q2P0C623 313 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 GCH1P30793 250 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SNU13P55769 128 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SIAH3Q8IW03 269 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 LGI3Q8N145 548 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SFT2D1Q8WV19 159 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SLC25A46Q96AG3 418 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 LYSMD1Q96S90 227 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 DDX31Q9H8H2 851 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 PDE7BQ9NP56 450 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 BET1LQ9NYM9 111 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 GIMAP2Q9UG22 337 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 KIAA1324LA8MWY0 1029 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 M0R3H8 397 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 EIF4EP06730 217 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 G0S2P27469 103 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 Q3ZCU0 254 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 C2orf27AQ580R0 203 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 NOL4LQ96MY1 436 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SFXN2Q96NB2 322 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ASH2LQ9UBL3 628 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 A8MU76 341 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR10J4P0C629 311 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ITGB8P26012 769 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 UBE2G1P62253 170 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RING1Q06587 406 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 DOC2AQ14183 400 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 PRAMEF8Q5VWM4 474 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 PRAMEF7Q5VXH5 474 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 PARD6AQ9NPB6 346 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OTOFQ9HC10 1997 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 CT45A10P0DMU9 189 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 BIDP55957 195 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ZNF90Q03938 601 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ADGRE4PQ86SQ3 457 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR9K2Q8NGE7 335 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ALG12Q9BV10 488 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SPNS1Q9H2V7 528 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 MEIS3P1A6NDR6 274 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 CLDN1O95832 211 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 FCER1GP30273 86 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RPS24P62847 133 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ZNF154Q13106 437 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 INIPQ9NRY2 104 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SNRPGP15A8MWD9 76 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 G3V2L1 256 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 H3BQ06 376 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 DDAH2O95865 285 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RPL7P18124 248 aaKnown RBP10.78□□□□□ -0.68
PTCH1-209ENST00000437951 GSK3AP49840 483 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 VASNQ6EMK4 673 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR2T2Q6IF00 324 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 CBLL1Q75N03 491 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 ADGRG3Q86Y34 549 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR2L13Q8N349 312 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 OR6K3Q8NGY3 331 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 RTP4Q96DX8 246 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 SLC12A9Q9BXP2 914 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 LMAN1LQ9HAT1 526 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 FAM198AQ9UFP1 575 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 MUTYHQ9UIF7 546 aa10.78□□□□□ -0.68
PTCH1-209ENST00000437951 LTN1O94822 1766 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 ZFP92A6NM28 416 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 ZNF724A8MTY0 619 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 ATP1B1P05026 303 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 OR13C7P0DN81 318 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 CALCBP10092 127 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 PREPP48147 710 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 GRM7Q14831 915 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 TIGITQ495A1 244 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 RPS27LQ71UM5 84 aaKnown RBP10.77□□□□□ -0.68
PTCH1-209ENST00000437951 SH3RF2Q8TEC5 729 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 APH1AQ96BI3 265 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 RASD2Q96D21 266 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 CXorf58Q96LI9 332 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 FAM173AQ9BQD7 235 aa10.77□□□□□ -0.68
PTCH1-209ENST00000437951 DIMT1Q9UNQ2 313 aaKnown RBP10.77□□□□□ -0.68
PTCH1-209ENST00000437951 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SCGB1C2P0DMR2 95 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 GPX3P22352 226 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CSN1S1P47710 185 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 RAC1P63000 192 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 HBA1P69905 142 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 Q499Y3 187 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 WBP2NLQ6ICG8 309 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CSNK1A1LQ8N752 337 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 REEP6Q96HR9 211 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 MRGPRX2Q96LB1 330 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms