RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CD79BP40259 229 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 CASP3P42574 277 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 TMEM44Q2T9K0 475 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 USP43Q70EL4 1123 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 MEPCEQ7L2J0 689 aaKnown RBP19.14■□□□□ 0.65
PTPRF-207ENST00000436724 MINDY2Q8NBR6 621 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 PROKR2Q8NFJ6 384 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 OR9Q1Q8NGQ5 310 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 LIPHQ8WWY8 451 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 KISS1RQ969F8 398 aaPredicted RBP19.14■□□□□ 0.65
PTPRF-207ENST00000436724 RASD2Q96D21 266 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 NRIP3Q9NQ35 241 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 PPP4R1LQ9P1A2 415 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 HIF3AQ9Y2N7 669 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF292O60281 2723 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 LIMS3P0CW19 117 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 LIMS4P0CW20 117 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 PRKCAP17252 672 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 MYL12AP19105 171 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 ATP6V1E1P36543 226 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 PRPS1P60891 318 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 RPS7P62081 194 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 Q0VFX4 171 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 EIF3IQ13347 325 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 RNLSQ5VYX0 342 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 DPY19L2P2Q6ZN68 376 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 GID4Q8IVV7 300 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 FAM98AQ8NCA5 519 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 SLC25A36Q96CQ1 311 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 PTDSS2Q9BVG9 487 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 NXF2Q9GZY0 626 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 WIF1Q9Y5W5 379 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 CHCHD2Q9Y6H1 151 aaPredicted RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 TNFSF15O95150 251 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 RAB40ALP0C0E4 278 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 TCEA1P23193 301 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 RPS15P62841 145 aaKnown RBP19.13■□□□□ 0.65
PTPRF-207ENST00000436724 DNASE1L3Q13609 305 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 SSX1Q16384 188 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 ZPLD1Q8TCW7 415 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 NMNAT3Q96T66 252 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 CDADC1Q9BWV3 514 aa19.13■□□□□ 0.65
PTPRF-207ENST00000436724 SPAARA0A1B0GVQ0 90 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 A0A1W2PQ72 361 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 IGHEP01854 428 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 CD63P08962 238 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 CD40LGP29965 261 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 RPL18Q07020 188 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 ALG10Q5BKT4 473 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 SLC43A2Q8N370 569 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 SECISBP2Q96T21 854 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 TEAD3Q99594 435 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 CENPOQ9BU64 300 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 EXOGQ9Y2C4 368 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 MRPS18BQ9Y676 258 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 ALPK2Q86TB3 2170 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 ZFHX2Q9C0A1 2572 aaPredicted RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 TRAV36DV7A0A075B6V5 113 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 LOC100506127A0A0U1RQW1 187 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 CCDC182A6NF36 153 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 NPIPB7O75200 414 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 BGLAPP02818 100 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 UQCRC1P31930 480 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 IL10RAQ13651 578 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 SSPNQ14714 243 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 PLEKHG7Q6ZR37 379 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 NANOGNBQ7Z5D8 188 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 RPS19BP1Q86WX3 136 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 LRRC75AQ8NAA5 344 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 OR51L1Q8NGJ5 315 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 TMEM234Q8WY98 164 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 Q96M85 177 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 TNFRSF10DQ9UBN6 386 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 FBXL2Q9UKC9 423 aa19.12■□□□□ 0.65
PTPRF-207ENST00000436724 YARS2Q9Y2Z4 477 aaKnown RBP19.12■□□□□ 0.65
PTPRF-207ENST00000436724 MUC6Q6W4X9 2439 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 IRGMA1A4Y4 181 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 HTR3EA5X5Y0 456 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 IFNGP01579 166 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 MRPL3P09001 348 aaKnown RBP19.11■□□□□ 0.65
PTPRF-207ENST00000436724 PAICSP22234 425 aaKnown RBP19.11■□□□□ 0.65
PTPRF-207ENST00000436724 SLC2A5P22732 501 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 DLSTP36957 453 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 RPS3AP61247 264 aaKnown RBP19.11■□□□□ 0.65
PTPRF-207ENST00000436724 C19orf48Q6RUI8 117 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 SMAP2Q8WU79 429 aaPredicted RBP19.11■□□□□ 0.65
PTPRF-207ENST00000436724 GATAD2BQ8WXI9 593 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 ASB15Q8WXK1 588 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 TBX5Q99593 518 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF649Q9BS31 505 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 A3GALT2U3KPV4 340 aa19.11■□□□□ 0.65
PTPRF-207ENST00000436724 RIF1Q5UIP0 2472 aaKnown RBP19.11■□□□□ 0.65
PTPRF-207ENST00000436724 TEX13CA0A0J9YWL9 993 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 A8MVM7 634 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 SCG5P05408 212 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CTXN1P60606 82 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CD300CQ08708 224 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 FOXF1Q12946 379 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF468Q5VIY5 522 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms