RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
CSTF3-202ENST00000431742 NAA11Q9BSU3 229 aaPredicted RBP12.82□□□□□ -0.36
CSTF3-202ENST00000431742 KLHL9Q9P2J3 617 aa12.82□□□□□ -0.36
CSTF3-202ENST00000431742 SEC14L4Q9UDX3 406 aa12.82□□□□□ -0.36
CSTF3-202ENST00000431742 FAM32AQ9Y421 112 aaKnown RBP12.82□□□□□ -0.36
CSTF3-202ENST00000431742 BAHCC1Q9P281 2608 aa12.82□□□□□ -0.36
CSTF3-202ENST00000431742 COL12A1Q99715 3063 aa12.82□□□□□ -0.36
CSTF3-202ENST00000431742 A0A087WUU8 490 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 ZNF724A8MTY0 619 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 M0R082 166 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 KPNA4O00629 521 aaPredicted RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 DVL2O14641 736 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CLDN14O95500 239 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 RAP2AP10114 183 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 GRPRP30550 384 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CHRNB3Q05901 458 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 RASGEF1BQ0VAM2 473 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 SLC25A35Q3KQZ1 300 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 FAM98BQ52LJ0 330 aaKnown RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 OTUD3Q5T2D3 398 aaPredicted RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 SLC46A3Q7Z3Q1 461 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 SPATA24Q86W54 205 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 SLC25A36Q96CQ1 311 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 STARD4Q96DR4 205 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 TACO1Q9BSH4 297 aaKnown RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 KLHL4Q9C0H6 718 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 FKRPQ9H9S5 495 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CHST11Q9NPF2 352 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 C20orf141Q9NUB4 165 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 MRPL39Q9NYK5 338 aaKnown RBP12.81□□□□□ -0.36
CSTF3-202ENST00000431742 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CLEC4AQ9UMR7 237 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 B3GALT5Q9Y2C3 310 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 CORINQ9Y5Q5 1042 aa12.81□□□□□ -0.36
CSTF3-202ENST00000431742 TRBV4-1A0A0J9YWV2 114 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 PLGP00747 810 aaPredicted RBP12.8□□□□□ -0.36
CSTF3-202ENST00000431742 CGAP01215 116 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 YES1P07947 543 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 BMP5P22003 454 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 LIMS1P48059 325 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 CTBP2P56545 445 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 CCNIQ14094 377 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 SLC17A1Q14916 467 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 POU4F3Q15319 338 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 C1orf146Q5VVC0 180 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 VWA1Q6PCB0 445 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 MBOAT2Q6ZWT7 520 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 MCEMP1Q8IX19 187 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 TUSC5Q8IXB3 177 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 NRMQ8IXM6 262 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 RNF113BQ8IZP6 322 aaKnown RBP12.8□□□□□ -0.36
CSTF3-202ENST00000431742 PAPD5Q8NDF8 572 aaKnown RBP12.8□□□□□ -0.36
CSTF3-202ENST00000431742 OR6K3Q8NGY3 331 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 LIPHQ8WWY8 451 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 SF3B5Q9BWJ5 86 aaKnown RBP12.8□□□□□ -0.36
CSTF3-202ENST00000431742 B3GAT1Q9P2W7 334 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 ZNF229Q9UJW7 825 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 EMC9Q9Y3B6 208 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 TESMINQ9Y4I5 508 aa12.8□□□□□ -0.36
CSTF3-202ENST00000431742 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 VAMP5O95183 116 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 CH25HO95992 272 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 CD8BP10966 210 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 GTF2E2P29084 291 aaKnown RBP12.79□□□□□ -0.36
CSTF3-202ENST00000431742 RRM2P31350 389 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 SMIM11AP58511 58 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 SIRPAP78324 504 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 SPIBQ01892 262 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 PRKCDQ05655 676 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 TFF3Q07654 80 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 SEC23BQ15437 767 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 FBXL19-AS1Q494R0 122 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 FGD3Q5JSP0 725 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 H1FNTQ75WM6 255 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-202ENST00000431742 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-202ENST00000431742 BTLAQ7Z6A9 289 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 OR9K2Q8NGE7 335 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 SGTBQ96EQ0 304 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 PIGMQ9H3S5 423 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 FANCFQ9NPI8 374 aa12.79□□□□□ -0.36
CSTF3-202ENST00000431742 CCM2LQ9NUG4 571 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms