RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 WWTR1Q9GZV5 400 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 IRF2BPLQ9H1B7 796 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 MIXL1Q9H2W2 232 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 MOKQ9UQ07 419 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 SPTBP11277 2137 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CD8B2A6NJW9 211 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 NTN3O00634 580 aaPredicted RBP11.69□□□□□ -0.54
DDX56-204ENST00000431640 NDUFB5O43674 189 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDX56-204ENST00000431640 LDOC1O95751 146 aaPredicted RBP11.69□□□□□ -0.54
DDX56-204ENST00000431640 CD14P08571 375 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 MRPL3P09001 348 aaKnown RBP11.69□□□□□ -0.54
DDX56-204ENST00000431640 CLUP10909 449 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CD8BP10966 210 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CXCR1P25024 350 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 SLC25A1P53007 311 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 PLCXD2Q0VAA5 305 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CCDC58Q4VC31 144 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 STPG1Q5TH74 334 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 PRAMEF17Q5VTA0 474 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 C1orf189Q5VU69 101 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 VASNQ6EMK4 673 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 CBLN3Q6UW01 205 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 APOOLQ6UXV4 268 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 GDPD3Q7L5L3 318 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 SYT14Q8NB59 555 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 ABHD4Q8TB40 342 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 HTRA1Q92743 480 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 NAT6Q93015 286 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 C4orf36Q96KX1 117 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 ATF6BQ99941 703 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 TBL1XR1Q9BZK7 514 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 NMNAT2Q9BZQ4 307 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 LRRN3Q9H3W5 708 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 MMP25Q9NPA2 562 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
DDX56-204ENST00000431640 IGLV3-12A0A075B6K2 115 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 OGG1O15527 345 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 LRRTM2O43300 516 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 SEC14L5O43304 696 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 TMCC2O75069 709 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ICOSLGO75144 302 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 GLCEO94923 617 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 TXNDC12O95881 172 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 GYPBP06028 91 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ASAH2BP0C7U1 165 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 MYL9P24844 172 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 TACR3P29371 465 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 TGM4P49221 684 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 OR12D2P58182 307 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ERVK-25P63136 954 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 CBFBQ13951 182 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 GPR139Q6DWJ6 353 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 DMKNQ6E0U4 476 aaPredicted RBP11.68□□□□□ -0.54
DDX56-204ENST00000431640 ARL9Q6T311 187 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 CCBE1Q6UXH8 406 aaPredicted RBP11.68□□□□□ -0.54
DDX56-204ENST00000431640 JAZF1Q86VZ6 243 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 SLC35F2Q8IXU6 374 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 ZNF441Q8N8Z8 693 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 HAVCR2Q8TDQ0 301 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 SNX33Q8WV41 574 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 OMA1Q96E52 524 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 FKRPQ9H9S5 495 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 COMMD3Q9UBI1 195 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 FBXL4Q9UKA2 621 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 GRIP1Q9Y3R0 1128 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
DDX56-204ENST00000431640 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
DDX56-204ENST00000431640 GVINP1Q7Z2Y8 2422 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 D6RAR5 112 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 LRRN3E7EW58 273 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SNPHO15079 494 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 OIP5O43482 229 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 HCRTR2O43614 444 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 PRKNO60260 465 aaPredicted RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 GP1BBP13224 206 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 IL7P13232 177 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SPI1P17947 270 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ITPKBP27987 946 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SDHAP31040 664 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 AQP2P41181 271 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 EVX1P49640 407 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 CTXN1P60606 82 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ZNF117Q03924 483 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 EFR3AQ14156 821 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ZNF79Q15937 498 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 CDONQ4KMG0 1287 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 KCTD20Q7Z5Y7 419 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 PRR22Q8IZ63 422 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms