RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 OR2A2Q6IF42 318 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 HMBOX1Q6NT76 420 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 RPL13AP3Q6NVV1 102 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 C1orf94Q6P1W5 598 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 TBPL2Q6SJ96 375 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 TMPRSS11FQ6ZWK6 438 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 AMIGO2Q86SJ2 522 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 ADGRE4PQ86SQ3 457 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 GTF2IRD2Q86UP8 949 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 MCEMP1Q8IX19 187 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 ZNF417Q8TAU3 575 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 FNDC9Q8TBE3 224 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 FANK1Q8TC84 345 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 GNPDA2Q8TDQ7 276 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 RNF128Q8TEB7 428 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 LIPHQ8WWY8 451 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 WNT2BQ93097 391 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 ZFP3Q96NJ6 502 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 MOGAT1Q96PD6 335 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 ZNF587Q96SQ5 575 aaPredicted RBP9.85□□□□□ -0.83
CHD4-202ENST00000430771 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 PKP2Q99959 881 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 TACO1Q9BSH4 297 aaKnown RBP9.85□□□□□ -0.83
CHD4-202ENST00000430771 OSBPL10Q9BXB5 764 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 SEMA6AQ9H2E6 1030 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 DCLRE1BQ9H816 532 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 CALHM2Q9HA72 323 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 ZNF556Q9HAH1 456 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 MGAT4BQ9UQ53 548 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 RASD1Q9Y272 281 aa9.85□□□□□ -0.83
CHD4-202ENST00000430771 CFAP46Q8IYW2 2715 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 A0A1W2PNV4 684 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 MBD3L4A6NDZ8 208 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 MBD3L3A6NE82 208 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 UNC119BA6NIH7 251 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 MBD3L5A6NJ08 208 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 SAC3D1A6NKF1 404 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 LRRN3E7EW58 273 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 E9PLN8 166 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 G3V2T6 193 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 AKAP8O43823 692 aaKnown RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 CYTIPO60759 359 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 AKR7A3O95154 331 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 PLGP00747 810 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 STSP08842 583 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 ASAH2BP0C7U1 165 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 ANPEPP15144 967 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 FUT1P19526 365 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 CBLP22681 906 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 PER3P56645 1201 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 PRPS1P60891 318 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 IL1RL1Q01638 556 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 PUDPQ08623 228 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 TSPAN31Q12999 210 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 PMS2P3Q13401 168 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 MRPL49Q13405 166 aaKnown RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 TMEM211Q6ICI0 200 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 ZNF770Q6IQ21 691 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 RPTNQ6XPR3 784 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 H1FNTQ75WM6 255 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 OAFQ86UD1 273 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 ATG16L2Q8NAA4 619 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 MBD3L2Q8NHZ7 208 aaPredicted RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 VKORC1Q9BQB6 163 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 C9orf16Q9BUW7 83 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 SF3B5Q9BWJ5 86 aaKnown RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 DGCR6LQ9BY27 220 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 NTN4Q9HB63 628 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 GP6Q9HCN6 339 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 GLRX2Q9NS18 164 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 STX18Q9P2W9 335 aaKnown RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 ENOPH1Q9UHY7 261 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 OAZ3Q9UMX2 235 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 OSGIN2Q9Y236 505 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 FAM215AQ9Y5M1 114 aa9.84□□□□□ -0.83
CHD4-202ENST00000430771 SMG1Q96Q15 3661 aaKnown RBP9.84□□□□□ -0.83
CHD4-202ENST00000430771 PHF3Q92576 2039 aaKnown RBP9.83□□□□□ -0.84
CHD4-202ENST00000430771 IGHV3-15A0A0B4J1V0 119 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 A0A1B0GUH1 482 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 KLF4O43474 513 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 IL2RAP01589 272 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 ADORA3P0DMS8 318 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 MAKP20794 623 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 GNLYP22749 145 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 TIMP3P35625 211 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 GSSP48637 474 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 RPS4XP62701 263 aaKnown RBP9.83□□□□□ -0.84
CHD4-202ENST00000430771 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD4-202ENST00000430771 H3F3AP84243 136 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 LTBQ06643 244 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 RASGEF1BQ0VAM2 473 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 PDK3Q15120 406 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 POU4F3Q15319 338 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 TMEM225Q6GV28 225 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 RTL6Q6ICC9 239 aa9.83□□□□□ -0.84
CHD4-202ENST00000430771 MTFR2Q6P444 385 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms