RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SKP2Q13309 424 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 EFR3AQ14156 821 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 SF3B4Q15427 424 aaKnown RBP eCLIP8.98□□□□□ -0.976e-9■■■□□ 18.7
ATG4B-212ENST00000430617 NTRK2Q16620 822 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 OPN5Q6U736 354 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 DEF8Q6ZN54 512 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 PACS2Q86VP3 889 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF611Q8N823 705 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF527Q8NB42 609 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ICA1LQ8NDH6 482 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 PIK3C3Q8NEB9 887 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 PAQR8Q8TEZ7 354 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 CNOT9Q92600 299 aaKnown RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 SPACA9Q96E40 222 aaPredicted RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 NODALQ96S42 347 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 EPYCQ99645 322 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 CIB1Q99828 191 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 TUBA1CQ9BQE3 449 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 FUZQ9BT04 418 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 PIGMQ9H3S5 423 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 EXOSC3Q9NQT5 275 aaKnown RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.98□□□□□ -0.97
ATG4B-212ENST00000430617 MAN2C1Q9NTJ4 1040 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF232Q9UNY5 417 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 SLC35A3Q9Y2D2 325 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 VWFP04275 2813 aa8.98□□□□□ -0.97
ATG4B-212ENST00000430617 IGHV4-30-2A0A087WSY4 118 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SCDO00767 359 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SOCS2O14508 198 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 KLF4O43474 513 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 TMCC2O75069 709 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 LYPD3O95274 346 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 THY1P04216 161 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 THBDP07204 575 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 UBL4AP11441 157 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 PRG2P13727 222 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 IGFBP5P24593 272 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 PTGDSP41222 190 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 GAS1P54826 345 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 RPS4XP62701 263 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SPIBQ01892 262 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 GK3PQ14409 553 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 GANABQ14697 944 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 NDUFAF6Q330K2 333 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 NHSL2Q5HYW2 709 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ANKRD34AQ69YU3 496 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 TMEM81Q6P7N7 255 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SHQ1Q6PI26 577 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF474Q6S9Z5 364 aaPredicted RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 DND1Q8IYX4 353 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 HS3ST5Q8IZT8 346 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SVOPLQ8N434 492 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ZNF614Q8N883 585 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 OR10G3Q8NGC4 313 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 OR5K1Q8NHB7 308 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ZPLD1Q8TCW7 415 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 PSD2Q9BQI7 771 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 POLR2J2Q9GZM3 115 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 POLR2J3Q9H1A7 115 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 UBQLN3Q9H347 655 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 REEP1Q9H902 201 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ACER3Q9NUN7 267 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SLC13A4Q9UKG4 626 aa8.97□□□□□ -0.97
ATG4B-212ENST00000430617 CNOT11Q9UKZ1 510 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 SAMHD1Q9Y3Z3 626 aaKnown RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 CHCHD2Q9Y6H1 151 aaPredicted RBP8.97□□□□□ -0.97
ATG4B-212ENST00000430617 ARRDC5A6NEK1 342 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 C17orf51A8MQB3 221 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 B4DXG7 233 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 PDLIM1O00151 329 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 AP3D1O14617 1153 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 EI24O14681 340 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 MSTNO14793 375 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 TRIM3O75382 744 aaPredicted RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 OR5F1O95221 314 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 HPRP00739 348 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 CSTAP01040 98 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 HPNP05981 417 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 SOD3P08294 240 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 UBTFL6P0CB48 400 aaPredicted RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 GKN3PP0CG01 181 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 ZNF16P17020 682 aaPredicted RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 ZNF23P17027 643 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 ACAA2P42765 397 aaKnown RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 HMGA2P52926 109 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 CDH12P55289 794 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 HOXC5Q00444 222 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 ZNF117Q03924 483 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 EPS8Q12929 822 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 PPP1R8Q12972 351 aaKnown RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 PIN1Q13526 163 aaPredicted RBP8.96□□□□□ -0.98
ATG4B-212ENST00000430617 LRRC36Q1X8D7 754 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 ENTPD8Q5MY95 495 aa8.96□□□□□ -0.98
ATG4B-212ENST00000430617 LIPNQ5VXI9 398 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms