RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IL32P24001 234 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 ACTC1P68032 377 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 ACTA1P68133 377 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 PLEKHG7Q6ZR37 379 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 YRDCQ86U90 279 aaKnown RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SAMD12Q8N8I0 201 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 NUDT8Q8WV74 236 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 AKAP1Q92667 903 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SDF2Q99470 211 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 DHDHQ9UQ10 334 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 DNAJB5O75953 348 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 CRYABP02511 175 aaKnown RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF773Q6PK81 442 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 XKR5Q6UX68 686 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 PSD4Q8NDX1 1056 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 OR9Q2Q8NGE9 314 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SARAFQ96BY9 339 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 CNN2Q99439 309 aaKnown RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 DDA1Q9BW61 102 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 I3L521 148 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 PHYHO14832 338 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 CD79AP11912 226 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 GPX2P18283 190 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 FGF11Q92914 225 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SPACA9Q96E40 222 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF583Q96ND8 569 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 FNDC1Q4ZHG4 1894 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SERPINA7P05543 415 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 C8BP07358 591 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 MMP11P24347 488 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 NPRL3Q12980 569 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 PODNL1Q6PEZ8 512 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 GALNT16Q8N428 558 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 FCAMRQ8WWV6 532 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 IER3IP1Q9Y5U9 82 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 MT-ND5P03915 603 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC2A5P22732 501 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 CPOXP36551 454 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 POU3F1Q03052 451 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 RNF113BQ8IZP6 322 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 HDAC2Q92769 488 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC41A2Q96JW4 573 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ARMC1Q9NVT9 282 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 PLA2G3Q9NZ20 509 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 IGHG1P01857 330 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ANKRD34CP0C6C1 535 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ETV5P41161 510 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 APOBEC1P41238 236 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 TAS2R43P59537 309 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 TUBA3CQ13748 450 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC25A43Q8WUT9 341 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 KLHL15Q96M94 604 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF442Q9H7R0 627 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC7A11Q9UPY5 501 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 PCYT1BQ9Y5K3 369 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 FUCA1P04066 466 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 FKBP2P26885 142 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 APLNRP35414 380 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 CLDN6P56747 220 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF766Q5HY98 468 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 AMY2BP19961 511 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 GPR157Q5UAW9 335 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 OLIG3Q7RTU3 272 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 LAT2Q9GZY6 243 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 GPR52Q9Y2T5 361 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC22A1O15245 554 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 MPPED1O15442 326 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 RAD51DO75771 328 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 BMP2P12643 396 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 KCNAB2Q13303 367 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SLC15A4Q8N697 577 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 OR5M1Q8NGP8 315 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
PTCH1-207ENST00000429896 TTC9Q92623 222 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 SCGB3A2Q96PL1 93 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 LMF1Q96S06 567 aa11.87□□□□□ -0.51
PTCH1-207ENST00000429896 ACP2P11117 423 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 DRD5P21918 477 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ERVK-25P63136 954 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SIRPAP78324 504 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 MLC1Q15049 377 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 CEACAM19Q7Z692 300 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 APOBEC4Q8WW27 367 aaKnown RBP11.86□□□□□ -0.51
PTCH1-207ENST00000429896 NXF5Q9H1B4 397 aaKnown RBP11.86□□□□□ -0.51
PTCH1-207ENST00000429896 COQ3Q9NZJ6 369 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 TRAV27A0A087WT01 109 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 A0A1B0GWA3 101 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms