RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 E9PBE3 544 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 HAX1O00165 279 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 GPIP06744 558 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 C8BP07358 591 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 UQCRBP14927 111 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 BGNP21810 368 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 SNRPD2P62316 118 aaKnown RBP14.38□□□□□ -0.11
VARS-216ENST00000428445 NIPAL3Q6P499 406 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 ANKRD16Q6P6B7 361 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 ZNF836Q6ZNA1 936 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 CREB3L2Q70SY1 520 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 EPHX4Q8IUS5 362 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 CLIP4Q8N3C7 705 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 POMGNT2Q8NAT1 580 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 NELFAQ9H3P2 528 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 MEAF6Q9HAF1 191 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 FKBP7Q9Y680 259 aa14.38□□□□□ -0.11
VARS-216ENST00000428445 LOC390937A0A1W2PQ73 354 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 SH3PXD2BA1X283 911 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 RGS16O15492 202 aaPredicted RBP14.37□□□□□ -0.11
VARS-216ENST00000428445 DBIP07108 87 aaKnown RBP14.37□□□□□ -0.11
VARS-216ENST00000428445 CECR9P0C854 216 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 NAAAQ02083 359 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 HGFACQ04756 655 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 ZSWIM7Q19AV6 140 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 CR1LQ2VPA4 569 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 RPS26P11Q5JNZ5 115 aaPredicted RBP14.37□□□□□ -0.11
VARS-216ENST00000428445 CROCCP2Q86T23 111 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 OR52E6Q96RD3 313 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 KCNS3Q9BQ31 491 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 SF3B5Q9BWJ5 86 aaKnown RBP14.37□□□□□ -0.11
VARS-216ENST00000428445 SEC14L4Q9UDX3 406 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
VARS-216ENST00000428445 CDHR4A6H8M9 788 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 ZNF503-AS2A6NEH8 195 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 LYNX1G3V0Z9 82 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 STAMBPO95630 424 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 LYNX1P0DP58 116 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 ETFAP13804 333 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 THBS4P35443 961 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 UBE2NP61088 152 aaKnown RBP14.36□□□□□ -0.11
VARS-216ENST00000428445 HOXC5Q00444 222 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 STX3Q13277 289 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 MPP2Q14168 576 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 KRT71Q3SY84 523 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 ATG16L1Q676U5 607 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 GLB1L3Q8NCI6 653 aaPredicted RBP14.36□□□□□ -0.11
VARS-216ENST00000428445 OR52P1PQ8NH57 321 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 SLC25A36Q96CQ1 311 aa14.36□□□□□ -0.11
VARS-216ENST00000428445 ZNF837Q96EG3 531 aaPredicted RBP14.36□□□□□ -0.11
VARS-216ENST00000428445 TMEM129A0AVI4 362 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 B9A039 149 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 ZNF587BE7ETH6 402 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 NDUFS8O00217 210 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 SDHDO14521 159 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 FRS3O43559 492 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 KRT75O95678 551 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 CRYAAP02489 173 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 PGRP06401 933 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 IGFBP1P08833 259 aaPredicted RBP14.35□□□□□ -0.11
VARS-216ENST00000428445 ZNF23P17027 643 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 THBS2P35442 1172 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 GTDC1Q4AE62 458 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 C1orf140Q5VVS0 124 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 ABHD12BQ7Z5M8 362 aaPredicted RBP14.35□□□□□ -0.11
VARS-216ENST00000428445 PEX5LQ8IYB4 626 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 SVOPLQ8N434 492 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 KATNB1Q9BVA0 655 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 TAPBPLQ9BX59 468 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 PLK3Q9H4B4 646 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 WDR55Q9H6Y2 383 aaPredicted RBP14.35□□□□□ -0.11
VARS-216ENST00000428445 AIG1Q9NVV5 245 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 CALML5Q9NZT1 146 aa14.35□□□□□ -0.11
VARS-216ENST00000428445 OR6C65A6NJZ3 312 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 A8MVM7 634 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 TMEM229AB2RXF0 380 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 hCG_2039718K7EN88 272 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 SEC14L2O76054 403 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 VAMP5O95183 116 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 BCHEP06276 602 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 RPS5P46782 204 aaKnown RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 IDH3GP51553 393 aaPredicted RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 MVDP53602 400 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 CLDN17P56750 224 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 ARF1P84077 181 aaKnown RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 ROR2Q01974 943 aaKnown RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 TRIP10Q15642 601 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 TNFAIP8L3Q5GJ75 292 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 PRAMEF8Q5VWM4 474 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 PRAMEF7Q5VXH5 474 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 WBP2NLQ6ICG8 309 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 SERPINA11Q86U17 422 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 DOK1Q99704 481 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 OBP2BQ9NPH6 170 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 THUMPD1Q9NXG2 353 aaKnown RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 CRNNQ9UBG3 495 aaPredicted RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 ZNF443Q9Y2A4 671 aaPredicted RBP14.34□□□□□ -0.11
VARS-216ENST00000428445 GPR45Q9Y5Y3 372 aa14.34□□□□□ -0.11
VARS-216ENST00000428445 ARPC4-TTLL3A0A0A6YYG9 625 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms