RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 BAG5Q9UL15 447 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PSME2Q9UL46 239 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PADI1Q9ULC6 663 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MRPS33Q9Y291 106 aaKnown RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 C15orf38-AP3S2A0A0A6YYH1 394 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 LOC101059948A0A1B0GTJ6 334 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 HMGN4O00479 90 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 SOCS6O14544 535 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 AIM2O14862 343 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ANGPT2O15123 496 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ALOX12BO75342 701 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 KLK3P07288 261 aaPredicted RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 TFPTP0C1Z6 253 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 C8orf89P0DMQ9 161 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CT45A8P0DMV1 189 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CT45A9P0DMV2 189 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 COX6A1P12074 109 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CYP4B1P13584 511 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 EFNA1P20827 205 aaPredicted RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 UQCRC2P22695 453 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 MMP11P24347 488 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 NUDT2P50583 147 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 RPS6KA3P51812 740 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 NCBP2P52298 156 aaKnown RBP eCLIP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 PSME3P61289 254 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 FUT5Q11128 374 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 FADDQ13158 208 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CAPRIN1Q14444 709 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 RGNQ15493 299 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 LTB4RQ15722 352 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 TRMT12Q53H54 448 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CT45A2Q5DJT8 189 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CROCCQ5TZA2 2017 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 MFSD12Q6NUT3 480 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ZCCHC12Q6PEW1 402 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 MEX3BQ6ZN04 569 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 LANCL3Q6ZV70 420 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ARPINQ7Z6K5 226 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ANKRD37Q7Z713 158 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 DHDDSQ86SQ9 333 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 TEX19Q8NA77 164 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 PCYOX1LQ8NBM8 494 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 C17orf47Q8NEP4 570 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 VPS37AQ8NEZ2 397 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 OR7G1Q8NGA0 311 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 OR8K3Q8NH51 312 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 FAM110BQ8TC76 370 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF721Q8TF20 911 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 CT55Q8WUE5 264 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 RNF138Q8WVD3 245 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 MOAP1Q96BY2 351 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 SENP5Q96HI0 755 aaPredicted RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 BTBD9Q96Q07 612 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 PANX1Q96RD7 426 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 PELOQ9BRX2 385 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 LMF2Q9BU23 707 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF700Q9H0M5 742 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM38AQ9H6F2 299 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 RMND5AQ9H871 391 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ADAP2Q9NPF8 381 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 NDE1Q9NXR1 346 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 IFT80Q9P2H3 777 aaPredicted RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 UPB1Q9UBR1 384 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 SLC7A8Q9UHI5 535 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 KCND3Q9UK17 655 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 PRPF19Q9UMS4 504 aaKnown RBP4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ENTPD4Q9Y227 616 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF780BQ9Y6R6 833 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 SPACA6W5XKT8 324 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 DSPPQ9NZW4 1301 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 ACANP16112 2415 aa4.93□□□□□ -1.62
C9orf3-205ENST00000427193 RTTNQ86VV8 2226 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 IGHV1-45A0A0A0MS14 117 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SAGE2PA6NJ88 616 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 KDM4EB2RXH2 506 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NPIPB9F8W1W9 429 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 TO15178 435 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 EMC8O43402 210 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 RAD1O60671 282 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ERAL1O75616 437 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CDC123O75794 336 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NKX2-2O95096 273 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 HMGN2P05204 90 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 PPIBP23284 216 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 HTR1EP28566 365 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NTSP30990 170 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CCT3P49368 545 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 PPM1FP49593 454 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 GSK3BP49841 420 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SLC7A2P52569 658 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 EMP2P54851 167 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 KCNJ2P63252 427 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ADORA2A-AS1P86434 159 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 PLIN5Q00G26 463 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 MS4A2Q01362 244 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 VEZF1Q14119 521 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NSDHLQ15738 373 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 IQCCQ4KMZ1 466 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 DNAL1Q4LDG9 190 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms