RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TBX5Q99593 518 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 OR11A1Q9GZK7 315 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 SLIRPQ9GZT3 109 aaKnown RBP24.01■■□□□ 1.43
LDB1-202ENST00000425280 FOXJ2Q9P0K8 574 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 STUB1Q9UNE7 303 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 PCDHGA1Q9Y5H4 931 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 CFAP54Q96N23 3096 aa24■■□□□ 1.43
LDB1-202ENST00000425280 CPAMD8Q8IZJ3 1885 aa24■■□□□ 1.43
LDB1-202ENST00000425280 OR6C68A6NDL8 312 aa24■■□□□ 1.43
LDB1-202ENST00000425280 LALBAP00709 142 aa24■■□□□ 1.43
LDB1-202ENST00000425280 MT-ATP6P00846 226 aa24■■□□□ 1.43
LDB1-202ENST00000425280 PSMA1P25786 263 aaKnown RBP24■■□□□ 1.43
LDB1-202ENST00000425280 MSX1P28360 303 aa24■■□□□ 1.43
LDB1-202ENST00000425280 DLX5P56178 289 aa24■■□□□ 1.43
LDB1-202ENST00000425280 FAM69AQ5T7M9 428 aa24■■□□□ 1.43
LDB1-202ENST00000425280 ZNF322Q6U7Q0 402 aaPredicted RBP24■■□□□ 1.43
LDB1-202ENST00000425280 MAMDC2Q7Z304 686 aaPredicted RBP24■■□□□ 1.43
LDB1-202ENST00000425280 GHDCQ8N2G8 530 aa24■■□□□ 1.43
LDB1-202ENST00000425280 OR10H4Q8NGA5 316 aa24■■□□□ 1.43
LDB1-202ENST00000425280 SPRYD4Q8WW59 207 aaPredicted RBP24■■□□□ 1.43
LDB1-202ENST00000425280 SLC25A36Q96CQ1 311 aa24■■□□□ 1.43
LDB1-202ENST00000425280 NMNAT2Q9BZQ4 307 aa24■■□□□ 1.43
LDB1-202ENST00000425280 SDHAF3Q9NRP4 125 aa24■■□□□ 1.43
LDB1-202ENST00000425280 CHCHD2Q9Y6H1 151 aaPredicted RBP24■■□□□ 1.43
LDB1-202ENST00000425280 MASP2O00187 686 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 LSM14AQ8ND56 463 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 TIMP4Q99727 224 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 VDAC3Q9Y277 283 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 CAB39Q9Y376 341 aaPredicted RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 TXNDC12O95881 172 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 SDHAP31040 664 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 OTX2P32243 289 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 CDKN2AP42771 156 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 SERPINB10P48595 397 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 GDPGP1Q6ZNW5 385 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 SMPDL3BQ92485 455 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 ZMYND19Q96E35 227 aaPredicted RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 TRMT61AQ96FX7 289 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 ALG8Q9BVK2 526 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 NDEL1Q9GZM8 345 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 PARD6AQ9NPB6 346 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 EXOSC4Q9NPD3 245 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 INPP5EQ9NRR6 644 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 ASB6Q9NWX5 421 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 TAS2R5Q9NYW4 299 aa23.99■■□□□ 1.43
LDB1-202ENST00000425280 FARSAQ9Y285 508 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 YARS2Q9Y2Z4 477 aaKnown RBP23.99■■□□□ 1.43
LDB1-202ENST00000425280 PNMA8CA0A1B0GUJ8 204 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 DAPL1A0PJW8 107 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 SERPINI2O75830 405 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 POU4F2Q12837 409 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 LEG1Q6P5S2 330 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 OR51L1Q8NGJ5 315 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 ZNRF4Q8WWF5 429 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 UFD1Q92890 307 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 CDCP1Q9H5V8 836 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 ISG20L2Q9H9L3 353 aaKnown RBP23.98■■□□□ 1.43
LDB1-202ENST00000425280 SDK2Q58EX2 2172 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 ETV2O00321 342 aaPredicted RBP23.98■■□□□ 1.43
LDB1-202ENST00000425280 TP53I11O14683 189 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 APOBEC1P41238 236 aaKnown RBP23.98■■□□□ 1.43
LDB1-202ENST00000425280 ACSM1Q08AH1 577 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 EIF3IQ13347 325 aaKnown RBP23.98■■□□□ 1.43
LDB1-202ENST00000425280 DCTN2Q13561 401 aaKnown RBP23.98■■□□□ 1.43
LDB1-202ENST00000425280 GALEQ14376 348 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 CSRP2Q16527 193 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 HES3Q5TGS1 186 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 OPN5Q6U736 354 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 C5orf46Q6UWT4 87 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 IL20RBQ6UXL0 311 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 ZFP41Q8N8Y5 198 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 TSPAN32Q96QS1 320 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 ASPNQ9BXN1 380 aa23.98■■□□□ 1.43
LDB1-202ENST00000425280 AHSA1O95433 338 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 SPI1P17947 270 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 BMXP51813 675 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 LGALS3BPQ08380 585 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 FOXF1Q12946 379 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 INPP5JQ15735 1006 aaPredicted RBP23.97■■□□□ 1.43
LDB1-202ENST00000425280 SGCBQ16585 318 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 TMPRSS11AQ6ZMR5 421 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 JAZF1Q86VZ6 243 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 OR5J2Q8NH18 312 aa23.97■■□□□ 1.43
LDB1-202ENST00000425280 SMAP2Q8WU79 429 aaPredicted RBP23.97■■□□□ 1.43
LDB1-202ENST00000425280 SF3B6Q9Y3B4 125 aaKnown RBP23.97■■□□□ 1.43
LDB1-202ENST00000425280 GGTLC2Q14390 218 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 SSPNQ14714 243 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 ASB15Q8WXK1 588 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 RELTQ969Z4 430 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 CPNE5Q9HCH3 593 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 GRHPRQ9UBQ7 328 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 LRRTM2O43300 516 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 AKAP8O43823 692 aaKnown RBP23.96■■□□□ 1.43
LDB1-202ENST00000425280 GRPRP30550 384 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 OPRL1P41146 370 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 DIO1P49895 249 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 ZNF41P51814 821 aaPredicted RBP23.96■■□□□ 1.43
LDB1-202ENST00000425280 RPS25P62851 125 aaKnown RBP23.96■■□□□ 1.43
LDB1-202ENST00000425280 PON3Q15166 354 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 EMC4Q5J8M3 183 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms