RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TP53P04637 393 aaPredicted RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 APEHP13798 732 aaKnown RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 TCEA1P23193 301 aaKnown RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 NOS3P29474 1203 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 GRPRP30550 384 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 RPL4P36578 427 aaKnown RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 MAGEA5P43359 124 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 GFRA1P56159 465 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 CARD18P57730 90 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR2B6P58173 313 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 RAC3P60763 192 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 RPS3AP61247 264 aaKnown RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 ISL1P61371 349 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 MYBPC1Q00872 1141 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 MYBPHQ13203 477 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 TOP3AQ13472 1001 aaPredicted RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 PDK3Q15120 406 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR7A5Q15622 319 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 SNAPC1Q16533 368 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 SGCBQ16585 318 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 TMEM225Q6GV28 225 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 CHMP1BQ7LBR1 199 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 SLC46A3Q7Z3Q1 461 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 NANOGNBQ7Z5D8 188 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 MEX3DQ86XN8 651 aaKnown RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 LNX2Q8N448 690 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 LRRC17Q8N6Y2 441 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR5M1Q8NGP8 315 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR13C2Q8NGS9 318 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 ABTB1Q969K4 478 aaPredicted RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 MIB2Q96AX9 1013 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 ARL5BQ96KC2 179 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 CNBD2Q96M20 576 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 MOGAT1Q96PD6 335 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR5B2Q96R09 309 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 PITX2Q99697 317 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 IFT27Q9BW83 186 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 OR11A1Q9GZK7 315 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 EGLN3Q9H6Z9 239 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 EXO5Q9H790 373 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 ZDHHC11Q9H8X9 412 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 SLC25A19Q9HC21 320 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 NPDC1Q9NQX5 325 aaPredicted RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 ALKBH4Q9NXW9 302 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 TVP23BQ9NYZ1 205 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
MDC1-205ENST00000425072 ZMIZ1Q9ULJ6 1067 aa9.3□□□□□ -0.92
MDC1-205ENST00000425072 TRAV27A0A087WT01 109 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 FAM166BA8MTA8 275 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 FTCDNL1E5RQL4 147 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 PLPP3O14495 311 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 TFECO14948 347 aaPredicted RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 ARPC3O15145 178 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 RNF13O43567 381 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 SOX14O95416 240 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 IFNGP01579 166 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 CD14P08571 375 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 TSPAN19P0C672 248 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 ADORA3P0DMS8 318 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 ZNF24P17028 368 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 POU3F2P20265 443 aaPredicted RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 IL11P20809 199 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 AHCYP23526 432 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 EPHA2P29317 976 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 GRK5P34947 590 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 SFTPDP35247 375 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 DIO1P49895 249 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 AGFG1P52594 562 aaKnown RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 CTXN1P60606 82 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 CXCR4P61073 352 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 RPS4XP62701 263 aaKnown RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 IL5RAQ01344 420 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 TEKQ02763 1124 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 SF3B4Q15427 424 aaKnown RBP eCLIP9.29□□□□□ -0.92
MDC1-205ENST00000425072 PLEKHN1Q494U1 663 aaPredicted RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 KRTCAP3Q53RY4 240 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 ALG10Q5BKT4 473 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 EMC4Q5J8M3 183 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 SLC25A30Q5SVS4 291 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 SLC6A19Q695T7 634 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 GPR139Q6DWJ6 353 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 ACSM5Q6NUN0 579 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 PXKQ7Z7A4 578 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 KIF18BQ86Y91 864 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 MEIOBQ8N635 442 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 RBMXL3Q8N7X1 1067 aaKnown RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 RHOXF1Q8NHV9 184 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 C9orf43Q8TAL5 461 aaPredicted RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 NEIL3Q8TAT5 605 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 FANK1Q8TC84 345 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 KLHL15Q96M94 604 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 NPAS1Q99742 590 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 PTDSS2Q9BVG9 487 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 POLDIP3Q9BY77 421 aaKnown RBP9.29□□□□□ -0.92
MDC1-205ENST00000425072 DEFB127Q9H1M4 99 aa9.29□□□□□ -0.92
MDC1-205ENST00000425072 CHST11Q9NPF2 352 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms